FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D10_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D10_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGCTG212.5No Hit
CTCCATGGCCTCCGCTGCCTGTTCACTCGATCCAGCCATCTGTTCCATAG16.25No Hit
GAAAAGGGAAAGTGGACGACAAACATGGTCCAGCCAAAAGCATGGAATAT16.25No Hit
GTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATT16.25No Hit
GTGTTACACAGTTTGGAAGTGTGCTTCAAATCCTATAAATTGATAAACAG16.25No Hit
AGATTGCTCAGTTCATTGATGCTTAAAGATGGGCCATATCTCTTGTCTTC16.25No Hit
CTCCTTGTGAGTGGTCTGTAGTAACTACTTTTTAATTTTGTGTTGGCAAA16.25No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC16.25No Hit
ATGCTGAAGGCAAGCACTTTAATGACTAATCCACCCAGGAACCCCTTGTT16.25No Hit
CTCCCTCCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTA16.25No Hit
GGATATTAAGTCAATGCAACTGCAACCTTACAAATAACTGTAAGTCGTTA16.25No Hit
TTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTT16.25No Hit
AATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA16.25No Hit
GCATTGTTTTTTAGCTGGCTTCTTACCTTTTCATATAAGTTCTTCACATT16.25No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)