FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_D10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAACTG12.857142857142857No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC12.857142857142857No Hit
ATTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT12.857142857142857No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT12.857142857142857No Hit
CAGTAGCGATCTCTACTTTTGAAAGAATGATAAGTACATTGATGCATAAT12.857142857142857No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGA12.857142857142857No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCC12.857142857142857No Hit
ATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCC12.857142857142857No Hit
ATAATCAATAGACCAATATCCCATAAAATAACAACAATACCTCACCTTCA12.857142857142857No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTCTGTCTC12.857142857142857No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCC12.857142857142857No Hit
CAATATAATAAAGGACATGATACCAGAGAGCACAGAACAAGGACAAACCC12.857142857142857No Hit
ATGAGAAATCCTCTCAGGACAGCAGACTCAACCCCAGATGTGCCTTCATC12.857142857142857No Hit
AACTAAGAGGGGTAGCCCCATTGCATTTGGGTAAATGTAACACTGCTGGC12.857142857142857No Hit
GGAAACAAACTGACGTTAGATAATCTGGCAGAAGCCTTCCACTTATTCAA12.857142857142857No Hit
ACAGTGGACCATATGTCCATAATAAAAAATTACAAAAAAGGAACAGAATC12.857142857142857No Hit
CTTACTTTACAAAATGAAAAAGTCAGTATCTTCCAATGTTTAAATTGAAT12.857142857142857No Hit
TCAATGAAATCATCAATCTTGCAAAACGAGAGAAAGCTAATGTTGAACAT12.857142857142857No Hit
AGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTGCCTTC12.857142857142857No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG12.857142857142857No Hit
AAATAACGCCATAATCAAAAATAACAAATAAAGAACCAAAGATAACAAAC12.857142857142857No Hit
ATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGCGACTGTCT12.857142857142857No Hit
CTGCCTTGCTCAAAGTACGTATGCTAGAGTCCCGATGTCTGTTCATTACC12.857142857142857No Hit
ATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGAT12.857142857142857No Hit
GTCAGTAAGTATGCTAGAGTCCCGGTTTCGTTTCAATACCAACACTACTT12.857142857142857No Hit
CATGATCCCAGGGTCCTGGGATCGATCCCCACATTGGGCTCTCTCCTCAG12.857142857142857No Hit
CATTAAGACATTTCAAAAAAAAAAAACCATAATGAAAAAAACAGACTCCA12.857142857142857No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.857142857142857No Hit
CTGGTACATCTGTTCATCCTCAAGAATTCCCCGTTGGCTTGTGTTGAGAA12.857142857142857No Hit
AATAATTGAAGGCAATACGAATTCTTTAGGTCTATGTCAGTCAGACATTA12.857142857142857No Hit
CAATATTCTAAAAAAAAGTAAAACATTATTAACCATAACAAAACCACGAT12.857142857142857No Hit
GAAAGATCATGTGCTAATTGGGCAAGCCGACGTCGCGTAGGTAATGACAC12.857142857142857No Hit
TTACAAAAACAAAAAATAAACAACAGGAAGACAAGATAATTAACAACAAA12.857142857142857No Hit
GCTTTACTAGTGGAGGAATCTGAGGCCCAGAGAGCGCTTGTGACTTGCCT12.857142857142857No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)