FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C7_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C7_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTGAAAATCATACATGAACAAAGACTAAACATAAAGATCAACGCACAT15.555555555555555No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCCTGTCT15.555555555555555No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTCTGTCTCTTATA15.555555555555555No Hit
CTCCATGGCCTGGGCTGGCGGGGGACGGGTGCGGGGGGGGGGTGGGGGGG15.555555555555555No Hit
AGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGTTCCACCATTGAAGAA15.555555555555555No Hit
ATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCATTCCACGATTTG15.555555555555555No Hit
GTCCTTGTTCATTCCTCTCTGGAATAATGTCCATTATTCTCTTGTCTGAT15.555555555555555No Hit
TCCTCGAACAAATCGAGAAAAGAGAAAACATACCCAGTACGAGAACTCTA15.555555555555555No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCCT15.555555555555555No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCACTGTCTCTTA15.555555555555555No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT15.555555555555555No Hit
CAATGATTCTCTTTTATTCTGTAAGTGTGTATCTCATTGACATCATACAC15.555555555555555No Hit
GTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTC15.555555555555555No Hit
ACATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGCTGTCTCTTATA15.555555555555555No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAGTGGACCTGTCTCTTATAC15.555555555555555No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA15.555555555555555No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT15.555555555555555No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACCTGTCTC15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)