FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTGAAATGTGCAATATTGGCAATCAAGACATACCTCAGCATCTGTCT11.7543859649122806No Hit
CTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGT11.7543859649122806No Hit
TCCTAGCACCCTGAAATCATGACTTGAGTCCAACCAGCTGAGCCACCCAG11.7543859649122806No Hit
ATAAAATGTCGCAGTCCCGCACTCGATAGAAACTCACTAAGTCAACTGTG11.7543859649122806No Hit
AAAGATGTCCATAAGAATTCTTTTTGTCGCTGTCTTGCTGTCAGTAATAA11.7543859649122806No Hit
AATAAGAACACCTCACACAAAATCAATTTTATGAAATAAAAGACAAAACA11.7543859649122806No Hit
CAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTC11.7543859649122806No Hit
GTTTTATATACCTTAGGGTAATGAACTGTACTTGTTGCTGTCTCTTATAC11.7543859649122806No Hit
TTGCTCAGATCATTTATGCTTAATGCTTGGCCATATGGTCCACAGAGGTA11.7543859649122806No Hit
ATAAGGGATTTGATGCCAGTGTGGACTGAACAAGGACAATGCGGCTGGCG11.7543859649122806No Hit
AAAACATACTCACTACATACTAAATAACAAGCCTTACTAAACTCTACCAA11.7543859649122806No Hit
TTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTC11.7543859649122806No Hit
TAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCTCT11.7543859649122806No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTGTCT11.7543859649122806No Hit
TGTCAGCTGTAATAGGGTAAATAATTCCAATCATCCACTTAATTCCAGTC11.7543859649122806No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA11.7543859649122806No Hit
TCACTCTCTTGTATGTGGCTGTCCATTTTCCCTAGTACTACTTATTGAAG11.7543859649122806No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA11.7543859649122806No Hit
GCGAAGTCCCGCACTCGCGAGATACTCACTAAGACCACAGTCGACCAAAT11.7543859649122806No Hit
CAACAAGTACATTTCATTACCCTAAGGTCTGTAAATCTTATTTCGAAAAG11.7543859649122806No Hit
GAAAAAATTAAAAAATATATCAAAAAAACAACTCACCCAAACGCGAGAGA11.7543859649122806No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.7543859649122806No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA11.7543859649122806No Hit
GGGTTCTTCTGGGGCCGTCCTGATGTGTCGGTGTTGGTTATGGCCTGGTG11.7543859649122806No Hit
AAGTCGTTTGGTTGCCTTGTTGTAATTGAATACTGGAGAATTGCACCTTT11.7543859649122806No Hit
CCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCCTGTCTCTTATAC11.7543859649122806No Hit
TTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAA11.7543859649122806No Hit
TGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCTGTCTCTT11.7543859649122806No Hit
GCCCAAGGTGGGGCTTGATCCTAGCACCCTGAAATCATGACTTGAGTCCA11.7543859649122806No Hit
GTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTACTCTAAGGCTG11.7543859649122806No Hit
TTTGGAGACAGGGCTTTTAAAGAGGTAATTAAGTTAAAATGAGGTCATTG11.7543859649122806No Hit
GGTGAAGCGGCTGCCTTCAGCTCAGGTCATGACCCCGGGTCCCGGGCTGT11.7543859649122806No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA11.7543859649122806No Hit
GCCTAGGGGAGAGCGGAGGTATTTCGGAGTGGGGGTTAGGTGGCATGCTG11.7543859649122806No Hit
ACCTTAGGGTAATGAACTGAAATTGTTTTTGCGCCATTCCTATCTGTATC11.7543859649122806No Hit
AAATTGGGTTGTTTGTCAGGTTGTCTTCATAGAACAATTAATCCCAATTA11.7543859649122806No Hit
CAAAAGGAATGTCACTAAAACAAATAAAGTTCAATAAACAAACGTAAATA11.7543859649122806No Hit
GTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTC11.7543859649122806No Hit
GTTCATTACCCTAAGGTATATAAAACTTATTTCGACATGGTCGAAAGGTG11.7543859649122806No Hit
AAACAAGGGTATATTACTCATTAGCAAGTAAGCCACTGTCTCTTATACAC11.7543859649122806No Hit
CTATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATTGAATATAATC11.7543859649122806No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCTGTCTC11.7543859649122806No Hit
TTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAA11.7543859649122806No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA11.7543859649122806No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTG11.7543859649122806No Hit
GTTAAAATCCTTCAACAGACCTACAGTGAAATAGGAGAGTCATGTCAACA11.7543859649122806No Hit
GCTCAGTGGGAAGCCTGCTTCTCCCTCTCCCCACTCCCCCTGCTGTCTCT11.7543859649122806No Hit
CCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGC11.7543859649122806No Hit
GCCTTGTTGTAATTGAATACTGGAGAATTGCACCTTTCGACCTTTTCGAA11.7543859649122806No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATCTGTCT11.7543859649122806No Hit
GAGGTGATACCATCACTCGGTCAGATCCAGCATCGTTTGTTTTGCTCCAG11.7543859649122806No Hit
TGATCATTGTCAGTAACTTTAAAAGCCATTGCCTGGCAAAAGAAAAGCAG11.7543859649122806No Hit
GCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGCTGTCTCT11.7543859649122806No Hit
GTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTA11.7543859649122806No Hit
ACATAAAAGAGAGTAATGAAAAATGAAAAACCCTAACTCTAAAAAAAAAA11.7543859649122806No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG11.7543859649122806No Hit
GTGTCTGGCTGGCTGGTGGGCGGGTGGCGGGCCGGGGGGGGGGCTGGCGC11.7543859649122806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)