FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACACAAGTATTAAAATCCAAAAAACAGAAATACAATAAAAAAATAAGAC12.2222222222222223No Hit
AGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAATAGAACTGAG12.2222222222222223No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCCTGTCTCT12.2222222222222223No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCCTGT12.2222222222222223No Hit
AGCGAAAGCAGGTCAATTATATACAATATGGAGAGACTAAAAGCTGTCTC12.2222222222222223No Hit
GCTATACAATTTCCTCTAGACAGCTTTATCTACAGCTGATAAGTTTTGAT12.2222222222222223No Hit
CTGTCTGGCTGTCAGTCAGTCTGCTAGTGTCCCGGTTTCGGGTCCTGCCC12.2222222222222223No Hit
ATTAACTTGTCTTCTTTAATTTGGTATCAAATATACATCATCCAATTCAT12.2222222222222223No Hit
CATTCCTGTCGGGAAGCAGGGGGAGGGGGCTCTTGTGTGCTGGGATGGGG12.2222222222222223No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAAC12.2222222222222223No Hit
ACTGTGGACCATATGGCCCGCAGCAAATGGTACACATCAGGAAGGCCAGA12.2222222222222223No Hit
ATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATTGAATATAGTTGG12.2222222222222223No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA12.2222222222222223No Hit
TTTTTAAACTATTCGACAACTAATTGAAGGCCATCCGAATTCTTTTGTTC12.2222222222222223No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCC12.2222222222222223No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC12.2222222222222223No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAACTG12.2222222222222223No Hit
CACATATGGTCAACAGACGTCTAAGTTAGAATCTGTCTCTTATACACAAA12.2222222222222223No Hit
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGCTGT12.2222222222222223No Hit
ACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATG12.2222222222222223No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC12.2222222222222223No Hit
CAAGATAGCAAAGTTCAAACATTATAAATGCTGGGCAATATCTAATATAT12.2222222222222223No Hit
CCCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAG12.2222222222222223No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCAT12.2222222222222223No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.2222222222222223No Hit
CATCTGGGGAGGAGTCTGCTGTCATGAGGGGATATCACATTTTTCGCAAA12.2222222222222223No Hit
TCCCATTACTCCCTGTCTCTTATACACATCTGACGCTGCCGACGAACTCC12.2222222222222223No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.2222222222222223No Hit
GTCAATGCACCTGCATCAAATCCAAGAACTCTAAGTCGTTTTGTTGCCTA12.2222222222222223No Hit
ATATGGCCCAGCATTAAGCATAAAAGAACAAATAAATCTTTCAAAATGAG12.2222222222222223No Hit
CAATTACAACAAGGCAACCAAAAGACTTACAGTTCGTGGAAAGGATGCAG12.2222222222222223No Hit
TAAAAGAACAAATCAAACATCAAAAATCACAGAACCCAAATGCAGACTAA12.2222222222222223No Hit
GTTCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC12.2222222222222223No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.2222222222222223No Hit
CATAAAGATATAGTAAAATAATATCAGAAATGGACATTAAGAATTTAAAA12.2222222222222223No Hit
CTTATGAGGATGTTAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA12.2222222222222223No Hit
CAATGAGATACCCAATTACAGCAGACAAGAGAATAATATCTGTCTCTTAT12.2222222222222223No Hit
GAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCCTGTC12.2222222222222223No Hit
ATGTTCAAATTATAGTAAACTACATTAGCAATATATATAAATACATTAAA12.2222222222222223No Hit
TCTCTACTTCTTCCGCCCGCCTCTCTCCTTGAGGGCCAGGTGGATGATGG12.2222222222222223No Hit
TCGTCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTT12.2222222222222223No Hit
CACTAAGGAGAGAAAAAAATAACTGAGAGATCTAATGTATCAGACCCGCA12.2222222222222223No Hit
TTAAATCTCAAAAAAAAAAATATAATTAACCAGCTTTTTATCATGAAAAT12.2222222222222223No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT12.2222222222222223No Hit
GTACAACAAATCACAACCAGAAGTGTACATAAAGAAACAGGACAAAAAAC12.2222222222222223No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)