FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCCTAT12.631578947368421No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTT12.631578947368421No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT12.631578947368421No Hit
CCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTC12.631578947368421No Hit
GTAATAAACAATCCGCCACGTACTTACTACGTCCGGGACATAACATGCCG12.631578947368421No Hit
GATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCC12.631578947368421No Hit
CCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCG12.631578947368421No Hit
AACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCCTGTCTCTTATACAC12.631578947368421No Hit
TTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGT12.631578947368421No Hit
GGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAAC12.631578947368421No Hit
AGTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCTGT12.631578947368421No Hit
ATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGACATCCTCATAA12.631578947368421No Hit
CCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCACTGTCTCTTATACAC12.631578947368421No Hit
GTACTACTCCATTGCTGTGACCAATATGCATGGTATATTTATCCAGAGTA12.631578947368421No Hit
TAGGTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTC12.631578947368421No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA12.631578947368421No Hit
AGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAG12.631578947368421No Hit
ATTCCATAGTGTGCATGTTCATTTTGTAGGTTCTCTAAGCTCTGTCTCTT12.631578947368421No Hit
GGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGT12.631578947368421No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA12.631578947368421No Hit
AGAATACAAATAATTTAAAGAATACCGAAAAAATTTGGAAGAATAATATA12.631578947368421No Hit
CCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCC12.631578947368421No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA12.631578947368421No Hit
ATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTCACT12.631578947368421No Hit
TGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGT12.631578947368421No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA12.631578947368421No Hit
TCTCTGTCGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATT12.631578947368421No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC12.631578947368421No Hit
TGCCCAGGAAGACTATAATTAGAATGTTGGCAGATTCATAAAGCTACCAA12.631578947368421No Hit
CATAATGGCACGATTCTCCACTCCTGAGAGGATTACTCATTATCGACAAA12.631578947368421No Hit
TTCACGGTCGCTGCTTTTGCGAGTTTGCGCTGGTCTTGGTGGCTTTCGGC12.631578947368421No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAACTG12.631578947368421No Hit
AGCTCGACGATCATTGGATTGAAGCATTGTCGCACAAAGTCTTCCATTTT12.631578947368421No Hit
AAACAAGGACGTTTTTAAAATCTTAGAAAACTAATTCATGGAAATCAGAA12.631578947368421No Hit
GAACTGAGAGATCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTA12.631578947368421No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA12.631578947368421No Hit
GATTGAAAGCGACAGAGAATAGTTTCGAACAAATAACAGTTATGCAAGCA12.631578947368421No Hit
AGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTG12.631578947368421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)