FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C3_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C3_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGGGACTGCGACATTAGAACTCTCAGTTCTTTTATTCTCTCCTGTCT112.5No Hit
GGGGAGAGGGAGAAGCAGGCTTCCCAAAGTGCAGGGAGCCTGATAGGGGG112.5No Hit
AATAAGACAAGAGAATAATGGACATGATTCCATAGAGGAAAGAACAACGA112.5No Hit
ATCAAACAGTAAAAAATATCCTGGAAATTATCACACATTAGCAGTAATCC112.5No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA112.5No Hit
GAATAAAGCAGAAACTAAGACACTCAGCAACAAGTCAACTACTTTAAAAT112.5No Hit
GATGAACCCCCCACACAGAATGAAGTGTCTGTTGGCCATGAGATACCCAA112.5No Hit
ATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAG112.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)