FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC24.081632653061225No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT24.081632653061225No Hit
TCCGAATACATGAAACAAACTTCCAAATGTGTGCATATTGCAGCAAACTT12.0408163265306123No Hit
GCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTC12.0408163265306123No Hit
GAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGTGA12.0408163265306123No Hit
GCGCTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCCTGTCTCT12.0408163265306123No Hit
TATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTATTC12.0408163265306123No Hit
CTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGA12.0408163265306123No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG12.0408163265306123No Hit
AAAGCAGGCAAACCATTTGATTGGATGTCAATCCGACTCTCCTTTTCCTA12.0408163265306123No Hit
CCTTTCCCGCAAGCTCGACGATCATTGGATTGAAGCATTGTCGCACAAAG12.0408163265306123No Hit
TCCCACCACTCCGGCCCCTTGCGCACTTAGGTCAGGTGCGTTCTCTGCTG12.0408163265306123No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT12.0408163265306123No Hit
CAAATGAACTGTACTTCATGTAGGCCCCTACCTAAAACAACAAGTTACCG12.0408163265306123No Hit
CATATTATTATCTAGTCTCCTGTAATAGCGAATCTCATTGCCATCATCCA12.0408163265306123No Hit
CCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTC12.0408163265306123No Hit
CTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCTGTCTC12.0408163265306123No Hit
TCCCTCCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAA12.0408163265306123No Hit
GTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCTGTCTCTTA12.0408163265306123No Hit
ACAATACATCTCTGTTGAAAGACGGTGCCATATTCACTCAGAGTGAGTTC12.0408163265306123No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA12.0408163265306123No Hit
GGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCAATGTATTCAAC12.0408163265306123No Hit
GAGTGGCTGTCAGGGACACGTCTACCTTAGGCTTAGGTTCTGGGATCAAG12.0408163265306123No Hit
TGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCCTGTCTCTTAT12.0408163265306123No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA12.0408163265306123No Hit
TTGCATCTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAA12.0408163265306123No Hit
ATAGAATATTGCTCAAGGCTTTCAAGTCATAATATTAACATAAACAGAAC12.0408163265306123No Hit
GCTATATGAAGCAATCGAGGAGTGCCTGATTAATGATCCCGGGGTTTTGC12.0408163265306123No Hit
GAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGCTGTCTCTTAT12.0408163265306123No Hit
AGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCAC12.0408163265306123No Hit
GAACAGCAAAAAACAACAAATAAATCAGCAAAATATGTCTCTTATACCAA12.0408163265306123No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.0408163265306123No Hit
CAAATTGATGGACATCCGAATTCTATTATTCTCACCATATCTCTCTCATA12.0408163265306123No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.0408163265306123No Hit
CGAAATACGATTTTATGATCTATGAAGTAAATTAAATCTCACAAACAGCA12.0408163265306123No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA12.0408163265306123No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC12.0408163265306123No Hit
AAATAAACACCAAAAAGTTCTAACCTTAATCAATAAAGCTAAGAACAAAG12.0408163265306123No Hit
GGACCTATCAAAACTTTCATAAATTACACAATTACATTATCTTCCATCAC12.0408163265306123No Hit
CTATATGGCACAAACTTTCTTCAACAATTATATTTAGTTAAAGTGCCCAT12.0408163265306123No Hit
TGGTAACACGGTTCGAGTCTCTGAAAATATACAGACTGTCTCTTATACAC12.0408163265306123No Hit
TTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC12.0408163265306123No Hit
AAATAAAACAAATAGTCTCTCAATAACAAATTTCAATAATAGAATAAAAT12.0408163265306123No Hit
GTATGCTACAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.0408163265306123No Hit
CGCAATGAGATACACACTAACAGCAGACAAGAGAATAAAGGACATGATTC12.0408163265306123No Hit
ATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTG12.0408163265306123No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)