FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC27.4074074074074066No Hit
AACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCCTGTCTC13.7037037037037033No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTT13.7037037037037033No Hit
TATATATTATTTAAAAAACATCCATTTAAAAAATTTTTTTAAATTTAAAA13.7037037037037033No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC13.7037037037037033No Hit
CCCAAACGCCAGAAACAAAAAGAACACAGCACCAACCAACAAGACCAACC13.7037037037037033No Hit
GCCCTGGTTCATTATCCTCAGGTAGTGGTCCATCAATCGGGTTATATGAA13.7037037037037033No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCC13.7037037037037033No Hit
GCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGG13.7037037037037033No Hit
AATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA13.7037037037037033No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT13.7037037037037033No Hit
ATGCTTAATGCTGGGCCCTCTGGAATCATGTCCATTATTCTCTTGTCTGC13.7037037037037033No Hit
CCCCTTACCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTC13.7037037037037033No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG13.7037037037037033No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTC13.7037037037037033No Hit
GCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGGCGCCT13.7037037037037033No Hit
ATTCAAAGGTAAAAAGGACAGAATAAGCAAAGGTAACCATGTGGCAAATT13.7037037037037033No Hit
GATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCAT13.7037037037037033No Hit
TAACAGCTGAGTCACCCAGGTGTCGCTCATTTTACTTTTCATCAATCTCC13.7037037037037033No Hit
CCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACTA13.7037037037037033No Hit
GTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG13.7037037037037033No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA13.7037037037037033No Hit
GCCATACAGCGACCAAAAGAATTCGGATGGCCATCAATTAGTGCTGTCTC13.7037037037037033No Hit
GATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGA13.7037037037037033No Hit
ATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTT13.7037037037037033No Hit
GACTGGTGCACCCCAGCTCAACCCGATTGATGGACCACTACCTGAGGATA13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)