FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC36.0No Hit
GTTGGATAAGCGTCTGCCTTCATCTCAGGTCATGCTCCTGTCTCTTATAC24.0No Hit
GACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGG12.0No Hit
ACAACTAATTGATGGAATTCCTAATTCTTTTGGTGTATGTATGTCTGTCA12.0No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACCTGTCTCTTA12.0No Hit
GCATTAGGCCTCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGGTAA12.0No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG12.0No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC12.0No Hit
CTGTCACTTAACAGAACATGGAGGAAAAGAAGCCAACAGAAACACCTGTC12.0No Hit
AGGTTACATGGGGCAGACTGCCAACCAGTACCCCCCTGCTTTTCCTCTGT12.0No Hit
GGACAGTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGACCTGAC12.0No Hit
GGGGTAGTGGGAGAGGGAGAAGCAGGCTCCCCGCTGAGCAGGGAGCCTGA12.0No Hit
CAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGCTGTCTCTT12.0No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC12.0No Hit
GGTGCAATTCTCCAGTATTCAATTACAGCAAGGCAACCAAACGACTTACA12.0No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGCCTGATCC12.0No Hit
GACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTC12.0No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT12.0No Hit
GTCTCCCTGCCTCTGCTTCTGCCCAGCCTTCCACCTGGAATGCCCTTCCC12.0No Hit
CTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAA12.0No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC12.0No Hit
GGGGATGCTCCAGGCAGAGAGAGAAGCAGGCTCCCTGCTGCCTGGGGCTG12.0No Hit
TATGAAAACAACGCTTGGGTAAATCAGACATATGTTAACATCAGCAACAC12.0No Hit
GTTCTAGGTGCTGAAATTAAAGGTCATATTTGCTTTTAAAACAGATCTCC12.0No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA12.0No Hit
GCTCCGCAGGAAGCCTGTTTCTCCCTCTGCCTGCCTCTCCTGTCTCTTAT12.0No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG12.0No Hit
GGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGC12.0No Hit
ACAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCATCAATGAACTGA12.0No Hit
GTCATTAAGCGTCTGCCTTCGGCTCAGGTCATGATTCCGGGGTCCTGTCT12.0No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT12.0No Hit
TCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCCTCACACATG12.0No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA12.0No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG12.0No Hit
CTACTGGGGCTTCTGGAGGGTGAAATGCTTAAACATGGTTCATAGGTTTC12.0No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.0No Hit
GATGTGTACTTTTTGATTATGGCCATATGGTCCACAGCTGTCTCTTATAC12.0No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC12.0No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.0No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA12.0No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA12.0No Hit
AAACAAGGCAGTGACAAGAGGACAAGATAGGGCTAAGAGAATGGAGGAAT12.0No Hit
AGTTACTGTAAGCCCCGTGAGGACATGTTCTAGGTCTGTCTTGTTCCTGG12.0No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCTGTCTCTTATA12.0No Hit
CTATCAGACCGAGTGAGGGTATCACCTCTGGCCGTAACATGGTGGAATAG12.0No Hit
AATTACAGCAGACAAGAGAATAATGGACATGATCTGTCTCTTATACACAT12.0No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACCTGTCTCTTAT12.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)