FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_C10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAA25.405405405405405No Hit
GCCTATTTGGGGCCATTGCCGGTTTCATTGAAGGGGGGTGGACAGGGATG12.7027027027027026No Hit
CTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAAT12.7027027027027026No Hit
GTACGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.7027027027027026No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC12.7027027027027026No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT12.7027027027027026No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAGGAGA12.7027027027027026No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA12.7027027027027026No Hit
GAAAAAAATAACAAATAAATATTTAAAAATAAGAGAAAACAAAACTTCTA12.7027027027027026No Hit
TAAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACT12.7027027027027026No Hit
GTTCCTGACAACCACCATTCTACTTTCCATCTCTATAAATTTGACTATGA12.7027027027027026No Hit
GTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCTGTCTCTT12.7027027027027026No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT12.7027027027027026No Hit
CCTTTTCAAAGATTGATCATTTAATTGATAATTAATTACAGTATCATATA12.7027027027027026No Hit
CTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACA12.7027027027027026No Hit
GAACAGGAACAGGATACACCATGGACACAGTAAACAGAACACACCAATAC12.7027027027027026No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA12.7027027027027026No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG12.7027027027027026No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG12.7027027027027026No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT12.7027027027027026No Hit
GGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATT12.7027027027027026No Hit
GCAATATCCTCCAAGGGGGTGTGCTAAGTGGTGCGGGGCGGGCGGGGAGG12.7027027027027026No Hit
GGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGA12.7027027027027026No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.7027027027027026No Hit
CCTAACAACTACTGCTAAAACAAGAACAAGAGAAAAGAGCCAGACTAAAA12.7027027027027026No Hit
GGCCTGACAGCAGAGACAGCCCAGCCAGGAGCACCCTCCGGCCTCCTTCC12.7027027027027026No Hit
ACTCCATACAGCCCTGGACCAGGACCAGGATACGCCATGGCCACAGTAAA12.7027027027027026No Hit
CTGTCAGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC12.7027027027027026No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG12.7027027027027026No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGTCAAGGGGACGTA12.7027027027027026No Hit
GAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAA12.7027027027027026No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG12.7027027027027026No Hit
CTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCA12.7027027027027026No Hit
TGATTGGGCCATGAACTTGTCTTGGGGAATATCTCAAACCTTTCAAATGA12.7027027027027026No Hit
CCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGA12.7027027027027026No Hit
GAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)