FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATCCTCCAGTATTCA13.125No Hit
TTGCAAGATTGCTCAGTTCATTGATGCATTCTGAGTGCGGGGTTCTTCTC13.125No Hit
AATATAAGAAATGCTAGCGACAAAGTTAAATAATAGATTGCATCACCTCA13.125No Hit
CAATATGCACACAGATGGAATTTTAAACTGAATTCAAAAGTCTATATCAT13.125No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTGTCTCTTATA13.125No Hit
GGAATGTGGTGCTTATGGCATTTTGCGCTGGAATTAGGAAAAGTAGAGTC13.125No Hit
GGGACCTAGACACCAAGGCCTCCACCATGCTAGAAATTCCAACCGGTCTC13.125No Hit
CTGTAATTGGGTATCTAATTGATGTCTCTTATACACATCTGACGCTGCCT13.125No Hit
GCCTAGTCTGATTAGCAACCTCCATGGCCTCCGCTGCCTGTTCACTCGAT13.125No Hit
TACAAATTGTTGCGACAAACATATACCACAAAATTACCGCCACAGGTGAA13.125No Hit
GAAATCAAGAGAAACCTAGTCATAAGCTTAACAACCAATACAGGATATAA13.125No Hit
ATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTC13.125No Hit
AAATGAACAAATCAAGTTATTGCTAGATATCAGAAGAACACGGAAGAGAG13.125No Hit
ATTTTTAAGTCATCTCTGTACCCAACATGGGGCTCGAACTCACAACCCTG13.125No Hit
TTAACATTTTGATTATGTCCAAATCAACCACAGTGTTCTTAGCAGAATCT13.125No Hit
TCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGG13.125No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA13.125No Hit
CAAAAATACTTAAACTTTCCAAAAAATAACATTATCATACAATCCTTTAA13.125No Hit
TGTCAGAAAGGTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTAAGT13.125No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCCTGTCTCTTA13.125No Hit
CTTCTGAGTTCTTCAATGGTGGAGCAGATCTTCATGATCTCAGAGAACTC13.125No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACC13.125No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA13.125No Hit
GCAGTAAACGAAAAAGCCATCATACCATATTGATTTCCTAATGCTGCCAC13.125No Hit
CCATAAAACAAAAATAAAAAACTACAAATCCGTAATGAAACATAAAAAAA13.125No Hit
CAAAATAAAAGAATATTGAAACCTAAAATTCCCAATATAACTTAAATTAA13.125No Hit
GCATTAAGCATCAAAGAACTTAGCAATCTTGCAAAAGGAGAGAAGGCTAA13.125No Hit
CTTTGGACTACCACGATTCAAATGTGAAGAACTTATATGAAAAGGTAAGA13.125No Hit
CCCCTCAAGTTGTGGAGACGCATATAGACTGTTGAATACAGATTTTGCCA13.125No Hit
TTAATATACTTAATACCATTGAATTATACATAGACAAGTGGTTGGATTAT13.125No Hit
GTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCT13.125No Hit
TCTCCATATTGAATATAATTGACCTGCTTTTGCTCCTGTCTCTTATACAC13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)