FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTC25.128205128205128No Hit
GTATGATCCAGCATCGTTTTTTTTGCTCCAGAGCGTTTGTCCTTGTTCAT12.564102564102564No Hit
CATATATAATACAAAAGGATTACAAAAAGGACTAAGCAATATTTTTAGAA12.564102564102564No Hit
GGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGA12.564102564102564No Hit
GTCAGAAACAATGCTAGAGACCCGTAGACGTGTCAATACCAAAAATCGGT12.564102564102564No Hit
AAGTAGGTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCT12.564102564102564No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG12.564102564102564No Hit
CATCCACAGTGTCTGGACCCTTGAGGAAATGTTGTGAGTGAGGCTGAAGA12.564102564102564No Hit
TAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCATTAA12.564102564102564No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCTG12.564102564102564No Hit
AATCTAGTGTGTGTAGAAGAATCTAAAATAAAAACAAAAGATAACCTTTC12.564102564102564No Hit
ATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGCTGTCTCTTAT12.564102564102564No Hit
GATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATT12.564102564102564No Hit
TTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACA12.564102564102564No Hit
CAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAAGCA12.564102564102564No Hit
GTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTC12.564102564102564No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT12.564102564102564No Hit
AATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCT12.564102564102564No Hit
GATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAACTGTCT12.564102564102564No Hit
GAATAATATTGCACAGCATTAAGCATCAATGAAATGAGCAATCTTGCAAA12.564102564102564No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACCTGTCTCTT12.564102564102564No Hit
GGAAAGAAGTCCTCGTGCTATGGGGCATTCACCATCCATCTACTAGTGCT12.564102564102564No Hit
TAGAATGTCAATTGCATCTGTACCTACTTCGCGCTACCTGTCTCTTATAC12.564102564102564No Hit
TGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGT12.564102564102564No Hit
GGCATGAAAACAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTATGGAA12.564102564102564No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAAAACTACGT12.564102564102564No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.564102564102564No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.564102564102564No Hit
ATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAG12.564102564102564No Hit
AACTGTAAGTCGTTTGGTTGCCTTGTTGTAATTGAATACTGGAGAATTGC12.564102564102564No Hit
GTCTCACTGTAAAGAAACCTGCTACACGAGCCTGGGCGATTCATGTCCAA12.564102564102564No Hit
CCCTATGGCACCTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGA12.564102564102564No Hit
GATCAAGAAAGAAGAGTTCTCCGAGATCATGAAGATCTGTTCCTGTCTCT12.564102564102564No Hit
GCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAG12.564102564102564No Hit
TGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTG12.564102564102564No Hit
TAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTAATTGGG12.564102564102564No Hit
AGAGACTACTCTGGCAGTAGGGTAGGCTGACGCAGCAGGGACTAGTACCT12.564102564102564No Hit
ATCGAGGACAAGGGTGTTGCCTATTCCTTTTAAGGACTTTTGATCCTGTC12.564102564102564No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)