FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT36.976744186046512No Hit
ATGCTTAACCATCTGAGCCACCCGGGTGCCCCTATCTGGCCTATTTTTAG12.3255813953488373No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA12.3255813953488373No Hit
CAGAAAAACAAAAGAAAATGCAACAAAAAGATATAACTAATCACCAAAAA12.3255813953488373No Hit
AAACAAGGGTTATGAGTAGAGGGTGTTTCAAGAAGGAAATTAACAAGCAG12.3255813953488373No Hit
GAGCAAAATTGTCAAACAATAAGTACATAATCATTTTTTTGGACACATTA12.3255813953488373No Hit
CTTCTGGAGGGTGAAATGCTTAAACATGGTTCATAGGTTTCTAGGACACA12.3255813953488373No Hit
GAGAATAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC12.3255813953488373No Hit
AGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTAC12.3255813953488373No Hit
GGATCATGACTTGAACCAAAGGCAGATGCTTAAGGACCTGTCTCTTATAC12.3255813953488373No Hit
ACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATG12.3255813953488373No Hit
GCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCA12.3255813953488373No Hit
GGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAA12.3255813953488373No Hit
GTTTCGCTCCAGAGGGTTTGTCCTTGTTCATTCATCTCTGGAATCTGTCT12.3255813953488373No Hit
CATCATATGAATTAAAAGATGACCTGATGTAGATGAGTGGTCCTGCACTG12.3255813953488373No Hit
GTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGC12.3255813953488373No Hit
GCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTC12.3255813953488373No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTT12.3255813953488373No Hit
GTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGT12.3255813953488373No Hit
AGTCATATCAGCATGAGGACAGTATTTGTCCTTCTGTGTCTGGTTTGTTT12.3255813953488373No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTCTGTCTC12.3255813953488373No Hit
GCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCA12.3255813953488373No Hit
CAGGCAGAGTGGGAGAGGGAGAAGCAGGCCTCCTGCCAAGCCTGTCTCTT12.3255813953488373No Hit
GCCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGT12.3255813953488373No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC12.3255813953488373No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA12.3255813953488373No Hit
CACACACACACACACACACACACACACACACACACACCTATCTAATAAAC12.3255813953488373No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT12.3255813953488373No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC12.3255813953488373No Hit
GCTGTAGCACGTGTCAGGATTTCCATCAAACTGAACACCAAGTAAAATGC12.3255813953488373No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.3255813953488373No Hit
GAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGG12.3255813953488373No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC12.3255813953488373No Hit
TCCACATGCCGGTTCTCTGAGTTCCAGAATTTCCCCAGCAGGAGGACTGG12.3255813953488373No Hit
CTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGA12.3255813953488373No Hit
AAAATGGATAGAGCAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAAC12.3255813953488373No Hit
GGATAAGACTGAATGGAAACTGAACGGACAGGTGCTGGTCTTCACACTCC12.3255813953488373No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.3255813953488373No Hit
GGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGAC12.3255813953488373No Hit
TGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCA12.3255813953488373No Hit
CCACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTT12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)