FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTAGCATTTTGTAAAAACAATGTCACATCTGAAAATGACACTAATACA13.125No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTCTGTCTCTTATA13.125No Hit
GTTGTCAGTCTGGGCCACAGTTGTGTCATACTTCTTTTCTCTCAGAATGC13.125No Hit
ATATAGGCAGCACAAAACGCACAGTAAGGAGTGAGATACCAACTACTCAT13.125No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG13.125No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT13.125No Hit
GTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGGAATGGCTA13.125No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATCTGTCTCTTATACA13.125No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT13.125No Hit
GTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGAT13.125No Hit
GATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATT13.125No Hit
CTTATATGAAAATGTAAGAAGCCAGCTAAAAAACAATGCCAAGGAAATTG13.125No Hit
ATAATAGTTTGTGCCACTTGTTAACATATTGCTGATTCACAGCATCGTTC13.125No Hit
CTATCATCCCGTCAGGCCCCCTCAAAGCCGAGATCGCGCAGAGACTGGAA13.125No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCGGAATGAAGTGGA13.125No Hit
GCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTG13.125No Hit
CATCCAGGTAAGACAATGACAGGAGCTGAAGTAAGTTCAAAGGCTACTGT13.125No Hit
AGCAAAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAA13.125No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTACTGTCTCTTATACACA13.125No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA13.125No Hit
ATCCTAGGGTCCTGGGATCGAGTCCCACATTGGGCCCCCTGCTCCACAGG13.125No Hit
CCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCATCAAT13.125No Hit
AAACAATTTTAGGACGAAAGGACTCCATCCAGAACAATTTTAGGGGAGTA13.125No Hit
CAAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTTCATCCTTTCC13.125No Hit
TCAAAGAACTTTGGACTACAACGATTCAAATGTGAAGAACTTATATGAAA13.125No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC13.125No Hit
GTGTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAG13.125No Hit
CCCAACATGCAGGATAAGACTGAATGGAAACTGAACGGACAGGTGCTGGT13.125No Hit
CATAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTCTGTCTCTTATA13.125No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA13.125No Hit
ATTACTTGGGTCACATGTTCACAAGGATGACCTCCATCTACTCGGCTGTC13.125No Hit
GATCACAACTGCAGGAACGCAAAAATGCATTATATTAAGTAAAAACAAGA13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)