FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n02_CIVIR_Ferret_Flu_Tissue_P1_A10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT25.88235294117647No Hit
TCTCTTGTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCAT12.941176470588235No Hit
CAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCA12.941176470588235No Hit
CACTACCTCCCCTTGCCAAATTAGCACATAATCGTTCTATCCTATTGCAA12.941176470588235No Hit
CCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATC12.941176470588235No Hit
CAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCC12.941176470588235No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCACGAGAAGA12.941176470588235No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGA12.941176470588235No Hit
GGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATCTGT12.941176470588235No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA12.941176470588235No Hit
GTGCCTGATTAATGATCCCCGGGTTTTGCTTAATGCCTGTCTCTTATACA12.941176470588235No Hit
CTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACC12.941176470588235No Hit
ACATGGTGGAATAGGAATGGCCCAACAACAAGTACCTGTCTCTTATACAC12.941176470588235No Hit
GAATTCTTGAGGATGAACAGATGTACCAGAAGTGCTGCAATCTATTCGAG12.941176470588235No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA12.941176470588235No Hit
GGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGT12.941176470588235No Hit
GTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTCCCAATTATCT12.941176470588235No Hit
AATGAACTGTACTTGTTGTGGGGCCATTCCTATTCCACCATGTTACGGCC12.941176470588235No Hit
CTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTT12.941176470588235No Hit
GCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGC12.941176470588235No Hit
CTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGACTGTCTCTTATAC12.941176470588235No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCTGTCTCTTATA12.941176470588235No Hit
CCCTCCAGAAGCCCCAGTAGCTAGGTAATCGTCAAGGTTTCCCTTTAGCC12.941176470588235No Hit
CACAGCGTCCCCATGCCACAGAAGCACATTAGCGGTATCTCCGTGTGAAA12.941176470588235No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA12.941176470588235No Hit
GACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGA12.941176470588235No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC12.941176470588235No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA12.941176470588235No Hit
CTGGCTGACTTAGGGACAAGAGACTGAAATGGTTAAATTCCATTTTGTTG12.941176470588235No Hit
CAATGGAGGTTGCTAAACAGACTAGGCAGATGGTACACTGTCTCTTATAC12.941176470588235No Hit
AGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAG12.941176470588235No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT12.941176470588235No Hit
GATTTGTACCATTATCAATTAATTTGGCCCATTCACAAACATAACTCTTA12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)