FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_H8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_H8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6680
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAGAACCGAGTCCAGAAATCAACCCACACAAGGACCGCCAGCGGATT170.25449101796407186No Hit
GGCCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATA160.23952095808383234No Hit
CTTTTATAACATGCACTCTTTTTTATGATAGAGGCACTGAAACTAAAGAA100.14970059880239522No Hit
ACCTAGAACAGTGCCTGGCAGAGAGTAGGTGCTCAGTAAATAGTTGTTGA90.1347305389221557No Hit
CCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATAAT90.1347305389221557No Hit
GCCCAAAGCAGGGCTCGATCCCAGGACCCGGGGTCATGACCTGAGCTGAA80.11976047904191617No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG80.11976047904191617No Hit
GGAAAAGAGAGTGGCATCTTCAACAAATGAATAATCAGGGGCGCCTGGGG70.10479041916167664No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)