FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_H2_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_H2_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1419
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGAGCACTTAAGGAAGAAACAACTGGGTGACTGCCCCAGAGAAAGTAT30.21141649048625794No Hit
GCCGAGCAGGGAGCCCAATGTGGGACTCGATCCCAGGACCCTGAGATCCT30.21141649048625794No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT30.21141649048625794No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA30.21141649048625794No Hit
GGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATA30.21141649048625794No Hit
GAATTTGGTGTGTCTCACACTGTCTGCTGTCCTGCTTCTGTCTCTTATAC30.21141649048625794No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.21141649048625794No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA30.21141649048625794No Hit
CCCTGAGATCATGACCTGAGCCGAAGGTAGAGGCCCTGTCTCTTATACAC20.14094432699083861No Hit
GGGGAAAGCAGGCTTCCCACCGAGCAGGGAGCCTGATGTGGGGCTCAACC20.14094432699083861No Hit
CCTGGATGGCTCAGTGGGTTAGACCTCTGCCTTCGGCTCAGGTCATGATC20.14094432699083861No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA20.14094432699083861No Hit
ATCGAGGAGTGCCTGATTAATGATCCCTGGGTTTTGCTTAATGCATCTTG20.14094432699083861No Hit
TTGCTGAGCAGGGAGCCTGACATAGGACTTGATCCCAGGGATCATGACCT20.14094432699083861No Hit
GGTCTCTGTCATCAAGGTGAAGATTCACGAAGCCACGGGTATGCCTGCAG20.14094432699083861No Hit
TCTGAGAGGCATCGACAGTTTCTGAGGGAAGTGGCCACCGCTCCTACCCC20.14094432699083861No Hit
GTAAATGTGGTACTCAGCTGGCTACCACTTTACCAGATCCATTCCTCTGG20.14094432699083861No Hit
CAACCCTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTG20.14094432699083861No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGCTGTCTCTTATAC20.14094432699083861No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT20.14094432699083861No Hit
GGGAGAAGGTGAGGTAGGCTTCCAGCCGAGCAGGGAGCCTGATGCGGGGC20.14094432699083861No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACGTCAGGCTGTC20.14094432699083861No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG20.14094432699083861No Hit
CTTCTAAGCTAGCTCAAAGGACTAGAAAACTCCCTTTTAAATTGTGGAAC20.14094432699083861No Hit
AAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAA20.14094432699083861No Hit
GGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCAT20.14094432699083861No Hit
CAATGCATTTTATTAAGGAAATTCCAGTCTGTGGTTAGGTATAATTGCTG20.14094432699083861No Hit
GCTTATTTGGTCACCACTTCCTCTCTGCCTGATATGTTCTCTTTTCTGGT20.14094432699083861No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA20.14094432699083861No Hit
GTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGAATGTGGT20.14094432699083861No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCCTGTCTC20.14094432699083861No Hit
TGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGAC20.14094432699083861No Hit
ATCATGAGGTGATCCAAAGGCAGACGCTTAACAACTGCTGTCTCTTATAC20.14094432699083861No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC20.14094432699083861No Hit
GCCTTCGCATCAGGTCATGATCCCAGGGTCCTGGGATGGAGCCCCACATC20.14094432699083861No Hit
GACCCCGGGTCCTGGGATCGAGTCCGGCATTAGGCTCCCTGCTCGGCTCT20.14094432699083861No Hit
GCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCCTGTCTCTTA20.14094432699083861No Hit
AGTCAGTTAAACATCTGCCTTCAGCTCAGGTCATGATCTCAGGGTCCTGG20.14094432699083861No Hit
GCCGCTCACTGTAAGCTTTGAACTACTGACTTGGACATCATTCATGGCTG20.14094432699083861No Hit
AGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTC20.14094432699083861No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG20.14094432699083861No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC20.14094432699083861No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA20.14094432699083861No Hit
ACCTAGAACAGTGCCTGGCAGAGAGTAGGTGCTCAGTAAATAGTTGTTGA20.14094432699083861No Hit
CCCTGAGATCATGACCTGAGCCGAAGGCAGAGGTTTTAACCCTGTCTCTT20.14094432699083861No Hit
GGATTGAGCCCTACATCGGGCTCCCTGCTCAGCGGGAAGCCTACTTCTCC20.14094432699083861No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACCTGTCTCTTATACA20.14094432699083861No Hit
GCCGAAGGCAGAGACTTAACCCACTGAACCACCCAGGTGCCCCTTACTGT20.14094432699083861No Hit
CTATTCAACTGTCGCCAGTTCATTGGTACTGGTAGTCTCCCTGGGGGCAA20.14094432699083861No Hit
GTGCTAGTCACAATGCAGCAGGGTGAAGACACTAGCCTCTGTCTCTTATA20.14094432699083861No Hit
GATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGCT20.14094432699083861No Hit
CACTCCACTCAGTTTTCCTTGCAGTATGTCTTACTGCTCACCAGAGACTG20.14094432699083861No Hit
GAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGG20.14094432699083861No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACCTGTCTCT20.14094432699083861No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGACTGTC20.14094432699083861No Hit
CTATGGAATGCCGCTCACTGTAAGCTTTGAACTACTGACTTGGACATCAT20.14094432699083861No Hit
CCCCAATGCAGGGCTCAATCCTAGGATCCTGGGATCATGACCTGAGCCAA20.14094432699083861No Hit
GTACCCCGAAGAACCCCGAAGAACCCCGCGGTCACCGATCGTGGTTCAGA20.14094432699083861No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC20.14094432699083861No Hit
GAACCGAGTCCAGAAATCAACCCACACAAGGACCGCCAGCGGATTTTCCA20.14094432699083861No Hit
AGCTATACCAGGGACTCCTGAGTGGCTGTCAGGGACACGTCTACCTTAGG20.14094432699083861No Hit
CATCTGAGTTGCATCGGGAGATAGCAGATTGGTCCCGAGACTGTCTCTTA20.14094432699083861No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT20.14094432699083861No Hit
GGGGGCACCTGGGTGGCTCAGTTGTTAAGTGTCTGCCTTCAGCTCAGGTC20.14094432699083861No Hit
GTACACATCAGGAAGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAAC20.14094432699083861No Hit
AAATGAACATGCACACTATGGAATGCCGCTCACTGTAAGCTTTGAACTAC20.14094432699083861No Hit
ACCAGAAGTGCTGCAATCTATTCGAGAAATTTTTCCCTAGCAGTTCATAT20.14094432699083861No Hit
CCCAAGAAGGGTCTTCTGTGTACCACAAATTAAGGAATATGATGACACGA20.14094432699083861No Hit
GTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG20.14094432699083861No Hit
GTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACCTGTCTCTTATACACAT20.14094432699083861No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT20.14094432699083861No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)