FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCCTGTCCCACCACAGTGGAGGTTGTTTCTCCAGCCTTCGTTATGGGA25.405405405405405No Hit
GAATACACACTCCTTGGTTCAAAATGGAGAGCTGGGGTGCCTAGGAGGCT25.405405405405405No Hit
GGGGAACAGGGAGAGGGAGAAGCAGGCTCCCCGCTGAGCAGGGAGCCTGA12.7027027027027026No Hit
ATGCATATGTGTGTGAAAAGATGTTTACTCTAATGCTAGCAATGAGGTCT12.7027027027027026No Hit
AGTCTCTGCTGGCCCAGGAGTCCTGGGGCCACTGAGGGTACCGTGCACAC12.7027027027027026No Hit
CCCAATATACTGAGTGAAACTTTGCTCAATTCTGTTTCTGTCTCTTATAC12.7027027027027026No Hit
ATACTCATGCTGTCTTCAACCAAACTTCCAAAATTTTAACAAAGGGTTTC12.7027027027027026No Hit
GCAAAAGCAGGGGTAGTGCGAGAGTGAGAAGCAGGCTTCCTGCTGAGCAA12.7027027027027026No Hit
AACTTGACAATATAGCCACAAAAAAAAACTAGCGGTCACTGAGTCTCTCA12.7027027027027026No Hit
CTCACCAGGGAGCCTGCTTCTCCCTCTGCCTCTGCCTGCCATTCTGTCTG12.7027027027027026No Hit
GTCTAGAGGAAATTGTATAGCCTAAAACACACAATGGAAAAAATGGGCTA12.7027027027027026No Hit
GTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCCT12.7027027027027026No Hit
GCTCTATCCCAGGACCCTGGGATCATGACCTGAGCTGAAGCTGTCTCTTA12.7027027027027026No Hit
GGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGATAT12.7027027027027026No Hit
TTCCTCCTGGACAACCCCTACACCAAAGTCTACTCATACTCATGCTCTGG12.7027027027027026No Hit
GCAAAAGCAGGGCGAGCAGCAGAGACTCACTGAACAGGGAGCGCAAGCCA12.7027027027027026No Hit
TCTCAGGGTCAAATGAAATCCTTTGTAAAGCACTTAGCACAATGTCTGAA12.7027027027027026No Hit
GTCTTAGCCAAGAAACATCACCACTATTTGACTGTTTAAACAAATGACAA12.7027027027027026No Hit
GTAGTAAGGAGCCCCTCGGAGAAGGGGATGCACTCACCTCTTTGCTTGGG12.7027027027027026No Hit
GGGAGTAAGAGATGGGGAAGCAGACTTCCCAAGGAGCAAGGAACCCGATG12.7027027027027026No Hit
GGCACCCCTGGAAGTTTGTACGTTTTGACCATCTTCACCCATCCCTCCAC12.7027027027027026No Hit
GAGAGGGAGACTGAGCATGAGCAGGGGAGGGGCAGAGAGAGAGGGAACGA12.7027027027027026No Hit
ATTTTTAACAGGATCAGCACTGGAGGAACGCAACAATGCATTTTATTAAG12.7027027027027026No Hit
GTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATA12.7027027027027026No Hit
GAAAAGACATGATCACACGGTATTTAAAATTCATACGTTTTATAAATATG12.7027027027027026No Hit
GTATGCAAGAGTTAATGTTGGCATAAGGCAGTTCACCGTGGGGGTGCACC12.7027027027027026No Hit
CCCCAAAATATATTTCCTTCCCCATTGCTTTGTAGTGTTTTGCCTTCTCA12.7027027027027026No Hit
ATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTAC12.7027027027027026No Hit
ATCCTTGGAAAACTCTGTGCTGATTTGTACCATTATCAATTAATTTGGCC12.7027027027027026No Hit
AGGATAACTTGGATAAGAGAAGGCAAGAAAACCATTTGATATCAGTGTTG12.7027027027027026No Hit
GCATTTTGTGGGGGAAAGAGAGGGCTGTTTTGTAGGTAGCACTGAAAGGC12.7027027027027026No Hit
ATGTTTATGTTGCTGAAACAAATCATTTGGTACTGTATGGAAGAACCAAA12.7027027027027026No Hit
TTTTCAAAGTGATCCAAGACATTTTGACTTATTGAAAGCCAACCCTTGTT12.7027027027027026No Hit
GAGCTGAAGGCAGCCGCTTCACCGACTGAGCCCCCCCGGCGCCCCTGATT12.7027027027027026No Hit
ACATAAAGTCGGGTGGCCAGTTGGCTGGGATGCATGACCTCAAAGGCCAG12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)