FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA25.263157894736842No Hit
AGCTGAAACGAGAAAGCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTG25.263157894736842No Hit
CACCAATAGAGGATCATTAAGAATTTGCCTTTGTCTCAGGTCGTTATCCC12.631578947368421No Hit
TTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGG12.631578947368421No Hit
GTCTGTAAACACGTCAAGGTTTTGAAATTAAAACCTAAGTATAATCAGTC12.631578947368421No Hit
TGCTTGAACTCTCTGGCCTTTTCTCATATGCATTTGACAAAAGAACTACT12.631578947368421No Hit
GTATGAGGGCATTTTCATCAATGATTCAAACTCATTGTCTGTCTCTTATA12.631578947368421No Hit
ACTAGTCCCTGCTGCGTCAGCCTACCCTACTGCCAGAGTAGTCTCTTCTG12.631578947368421No Hit
TGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTC12.631578947368421No Hit
GAACACACTGAGTACTTAACAAGTCAATTCAAAATAAAATGTGTTTCAAA12.631578947368421No Hit
TTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGT12.631578947368421No Hit
CAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG12.631578947368421No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGGCCCA12.631578947368421No Hit
CTTATCTCTTGTTCTACTTCAAGCAGTATGTAAGGCCTGTCTCTTATACA12.631578947368421No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.631578947368421No Hit
ACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTC12.631578947368421No Hit
GTGAGCTATTCAGAGGGCAGTTACGAAGAAACCCAGTATCTGTCTCTTAT12.631578947368421No Hit
CGATTTGCAGACAATGGATTGGGTGATGCCCCATTCCTTGATCGGCTCCG12.631578947368421No Hit
CTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCC12.631578947368421No Hit
GATCAAGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGTTCCACCATTG12.631578947368421No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC12.631578947368421No Hit
AAACAATTCATATAATTAAATAAAAACAAGTAACTGGTAAGGATCACACA12.631578947368421No Hit
CCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACCTGTCTCT12.631578947368421No Hit
CTGCACTCCCATTCGCTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCAT12.631578947368421No Hit
CAATAAAACCTAAACTTGAAAATTCAAAAAATATAAATAACAAATCAAAA12.631578947368421No Hit
CTGGGTTCCTCTGCTGTCACTTCATCTTAATCAATGACCAGGACTAGCTA12.631578947368421No Hit
ATGCATAAGTGTATTTTGGGGCCCTCTGATCTATTCTATTGTGCCTTGTT12.631578947368421No Hit
GTTCTATGAAGACAACCTGACAAACAACCCAATTTTCTCTGTCCTAATTA12.631578947368421No Hit
TTTCTTCTCTGTTTAATTTTGCTTCCTCTGAGTATTTTGGGTAGTCATAA12.631578947368421No Hit
GCCTCATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGT12.631578947368421No Hit
ACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAGGG12.631578947368421No Hit
ATCGAGGAGTGCCAGATTAATGATCCCTGGGTTTTGATTAATGCATCTTG12.631578947368421No Hit
CCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTAATCATTCTT12.631578947368421No Hit
ACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCCTGTCTCTTAT12.631578947368421No Hit
CAATAATTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTAT12.631578947368421No Hit
GTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCACTAGAGG12.631578947368421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)