FastQCFastQC Report
Wed 26 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G1_new2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_G1_new2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3055149
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1871246.124873124027666No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1196853.9174848755330753No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATAC214940.7035336083444703No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTAT204740.6701473479689534No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACAC182920.5987269360676026No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTT181910.59542104165787No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTC165170.5406282966886394No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACAT164260.5376497185570982No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCT150950.4940839219298306No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTC140350.45938839644154833No Hit
CACACACACACACACACACACACACACACACACACACCTGTCTCTTATAC122220.40004595520545805No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTG120610.39477616312657743No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC117110.3833200933898805No Hit
CACACACACACACACACACACACACACACACACACACACCTGTCTCTTAT115200.37706835247642584No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCC107240.3510139767323951No Hit
CACACACACACACACACACACACACACACACACACACACACCTGTCTCTT103870.3399834181573468No Hit
CACACACACACACACACACACACACACACACACACCTGTCTCTTATACAC102770.3363829390972421No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC96930.3172676684508677No Hit
CACACACACACACACACACACACACACACACACACACACACACCTGTCTC96120.31461640659751783No Hit
CACACACACACACACACACACACACACACACACCTGTCTCTTATACACAT88750.29049319689481595No Hit
CACACACACACACACACACACACACACACACACACACACACACACCTGTC84350.27609128065439686No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACC82500.2700359295078571No Hit
CACACACACACACACACACACACACACACACCTGTCTCTTATACACATCT80310.2628677030154667No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGA71240.23318011658351195No Hit
CACACACACACACACACACACACACACACACACACACACACACACACCTG71130.2328200686775015No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG63320.2072566673507577No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG61090.19995751434709075No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT57770.1890906139111382No Hit
CACACACACACACACACACACACACACACCTGTCTCTTATACACATCTCC54610.1787474195202918No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC49280.1613014618926933No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT47210.1545260149341325No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGAGC45620.14932168611089017No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC43960.1438882358929139No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA43010.14077873125009616No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA37110.12146707083680698No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA35460.11606635224664984No Hit
CACACACACACACACACACACACACACCTGTCTCTTATACACATCTCCGA34640.11338235876548082No Hit
GTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGAGCCC33360.10919271040463166No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA32670.10693422808511138No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA31350.10261365321298568No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)