FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_F9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_F9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGCTTTCAAACTGTGCCGCATTTCAACAATTAACCACCTTATTTCCTC12.5No Hit
AATGTGGACGGTGACAGTAATAAACAATCCGCCACGTACTTACTACGTCC12.5No Hit
GAGGGCGTGGAGCAGGTGCTAGACTAGGCCAGGATTAAGCTACCCAAACT12.5No Hit
AACAAATTAAAATAGAATAATTCTATGAAATTTACAGAAAACACTACATT12.5No Hit
CCTGAGACCATGACCTGAGCCAAAGGCAGCAGCTTAACCGACTGAGCCAC12.5No Hit
CCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTC12.5No Hit
CTGGGATCATGACCTGCACTGAAGGCAGCGGCTTAACCACCCAGGCGTCC12.5No Hit
CAAAAGAATCAAAAGGTGTTCATCACAACCAACTCAAAAACAAATTAAAA12.5No Hit
TAATTTCATCTGGGGTTGTGATCTCAGGGTCGTGGGATCCAGCCTCGCAC12.5No Hit
ACACAAGGACCACCAGCGAATTATCAAAAACTGCACAAACAAAATCGCTC12.5No Hit
GTAGGCGACATCTTCTTAATGACAGGTACAGGTACAATAGCCAAAGTTGG12.5No Hit
AACTTACCCCCAGGAATCTGGTCCTTATGACAGCACCTAGAGTGTTTTAC12.5No Hit
TTTCATTAAAATCACTAGTAAAAACAAAATAACACATAATAAAAATCCAG12.5No Hit
GGACTACCACGATTCAAATGTGAAGAACTTATATGAAAAGGTAAGAAGCC12.5No Hit
TTCCTATACTCTGCACCCCATCCATCTACAGGTCTGGTCAGCTCTCCCTC12.5No Hit
GAAAAATAATCACCTTATGTAAAAATCCAGTGACAACACTTACAAGAAAT12.5No Hit
CCCCTGAGGCTGCAGCAGAATGTGAGCAATCCCTGGTCCACCTGGACCTG12.5No Hit
AAAATTTCCATATCCATTGAATTAATTATAAAAAGAACCAAAATATTTAC12.5No Hit
GCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGG12.5No Hit
ACATAAAACAAAAAGAATAAATAAAATCAAAAACATTAAACACAAACAAT12.5No Hit
GCTCATGAGTGTCTCCAAGATGCATATCTTTGTTTTTAATTCCAGTGTAA12.5No Hit
GGAGAGAATAAAAGAACTGAGAGATCTAATCTCGAAGTCCCGAACTCGCG12.5No Hit
GCTGTAACTTCTGTGACGACTCTTGGTGATGTGTGGTTTGTCTTCTGGGT12.5No Hit
ATCCATCACAAATAGCACTTCATCCTCGCTGTCAGCTAGAAAGCCCTTAC12.5No Hit
CATAATAAAAATACAACAAAACTTCAATATACAAAAGCAAATTATAATAT12.5No Hit
GTTCTATTGGAAAATGAAAGAACTTTGGACTACCACGATTCAAATGTGAA12.5No Hit
ACTTTGGACTACCACGATTCAAATGTGAAGAACTTATATGAAAAGGTAAG12.5No Hit
TTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTTTTGAC12.5No Hit
GTTGAAGGGGCAAAAAGGCTGGTAGGCAGAGCTCCAGGGCCGGGCAAGCT12.5No Hit
GGTCATAATCCCAGAATCTTGGGATTGAGCCCTACATCGGGCTCCCTGCT12.5No Hit
AAACAATGAAAACAACAAAAACAATAAAAAAAACACCTAAAATACATCAT12.5No Hit
GTTTAAAGGACCTCCTGTGCCACCTTAACAAAACAGAACCTTATTCTAAT12.5No Hit
GTAAGCCACAATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGAC12.5No Hit
GATATTTGCTGCAATGACGAGAGGATCACTTGAATCGCTGCATCTGCACT12.5No Hit
AAACATTGACAACATCAACTTCATAAAGACAGCCGGTTACTTCTCTAGCC12.5No Hit
GGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACT12.5No Hit
CCTAACTATCTTTTTTCCCTTATCATCAGCTTCTCTAAAGTATACGGGAG12.5No Hit
CCATGGGAAGGACGAGGAGGGCAATGTGGACGGTGGCAGTAATAAACAAT12.5No Hit
CCAGAAAAGAGAACATATCAGGCAGAGAGGAAGTGGTGACCAAATAAGAA12.5No Hit
GAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGA12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)