FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_F1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_F1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3048869
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1868886.129748441143256No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1194603.918174247565245No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATAC214670.7040971586512901No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTAT204440.6705437327743501No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACAC182630.5990090095704341No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTT181600.5956307076492955No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTC164920.5409218959555167No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACAT164030.5380027807032706No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCT150690.4942488509673587No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTC140180.4597770517526335No Hit
CACACACACACACACACACACACACACACACACACACCTGTCTCTTATAC121930.39991878955770155No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTG120450.3950645304865509No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC116930.3835192656686791No Hit
CACACACACACACACACACACACACACACACACACACACCTGTCTCTTAT115000.3771890494475164No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCC107070.35117940455952684No Hit
CACACACACACACACACACACACACACACACACACACACACCTGTCTCTT103630.3398965321238794No Hit
CACACACACACACACACACACACACACACACACACCTGTCTCTTATACAC102590.3364854311549627No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC96710.3171995910614723No Hit
CACACACACACACACACACACACACACACACACACACACACACCTGTCTC95980.314805260573675No Hit
CACACACACACACACACACACACACACACACACCTGTCTCTTATACACAT88610.29063236236125595No Hit
CACACACACACACACACACACACACACACACACACACACACACACCTGTC84190.27613518324336006No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACC82300.2699361632133096No Hit
CACACACACACACACACACACACACACACACCTGTCTCTTATACACATCT80050.2625563774632495No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGA71140.23333242589301145No Hit
CACACACACACACACACACACACACACACACACACACACACACACACCTG71020.23293883731967496No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG63100.20696199147946337No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG60970.1999757943027398No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT57640.18905371139265084No Hit
CACACACACACACACACACACACACACACCTGTCTCTTATACACATCTCC54520.17882040848590083No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC49230.16146971221131506No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT47180.15474590741681588No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGAGC45490.1492028683423263No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC43880.14392222165006105No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA42910.14074071401559068No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA37020.12142207487432224No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA35420.11617422722983506No Hit
CACACACACACACACACACACACACACCTGTCTCTTATACACATCTCCGA34550.11332071007314516No Hit
GTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCTCCGAGCCC33290.10918803005311149No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA32610.10695769480420445No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA31340.10279221573639273No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)