FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_E9_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_E9_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATATGGCCCAGCATTAAGCATCAATGAAAGTAGCCTGTCTCTTATAC12.0408163265306123No Hit
ACACCGCTCTGACACCCACAACCTCCTGCATTTGCTCCTGTATCTAATAC12.0408163265306123No Hit
GAAATAAACACAAACCACAAAAAAAAAAAAAATAACAAAAAACCATGACT12.0408163265306123No Hit
TCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTGTCTCTTAT12.0408163265306123No Hit
GACAGACAGGGTGAACTCTTCTCTGAAGTCCTGGGGGGAGAGAGTGATAT12.0408163265306123No Hit
CACATATACAACATCTCATCAACCAAACTACAAATACAAACCGGTCTCAT12.0408163265306123No Hit
ACATATCACAAAGACATCAACAACTTAAAAAATAACACATATAAAAAAAA12.0408163265306123No Hit
ATATGAAGCAATCGAGGAGTGCCTGATTAATGATCCCAGGGTATTGCTTA12.0408163265306123No Hit
CTAAAAAACAGTAGACACTAACATATTAAACTTATTCACAATCCAGTAAC12.0408163265306123No Hit
TCACTACCTCCAGAGCAGAAATGAAAAGAGGAGAGAGAAATTGGGACAGA12.0408163265306123No Hit
CAATCCAGGCTGAGGGTTTGGAACGAAGATTTCAACAACAAAGATTTCAA12.0408163265306123No Hit
CCAACCAACTGAGCCACCCAGGCGTCCCACTCTGTGATGTTTGATCCTGG12.0408163265306123No Hit
GGACCAGAGTGAGGAGGCGGTCTCGCCAGGTCCTCTAGGGTCGTAGGAGG12.0408163265306123No Hit
CACTAATACAAAAGAAAAAAAATACAAACATTTAACATGAACAATATACA12.0408163265306123No Hit
AAACAAAAACAAATAACACGAATCACACCAACTCAAAACAAAAAAAAAAG12.0408163265306123No Hit
GGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACA12.0408163265306123No Hit
GAATTTTACCACAAATGCGATAACAAGTGCATGGAAAGTGTCAAAAATGG12.0408163265306123No Hit
GCCTAGAGAAGCATGGGGAGCCTGACTGATGCATGACCATTCTTTCCCCA12.0408163265306123No Hit
ATGGATTGGGTGATGCCCCATTCCTTGATCGTCTCCGCCGAGATCAAAAG12.0408163265306123No Hit
AGTAAAAAAAAATAGCAACATTAAACATCATGACATAATATTAATATCTC12.0408163265306123No Hit
GCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAG12.0408163265306123No Hit
CTTCTGACTACTGTGTGTAATGCAGCTATTGATTTGGGTGTACAAATACC12.0408163265306123No Hit
GCCAAGGACATTGGAAACGGCTGCTTACAATTTAACCAACAATCCTTAAA12.0408163265306123No Hit
TACTAGTAGACATTATGTAATAACAACAATGTAACATCTCACTAAAACAA12.0408163265306123No Hit
CCTTTCAGCTTTCTGCAATCCTCCCCATCTCCTGCACCTACTCTACTCAG12.0408163265306123No Hit
CTTCAGTTAAAACATTAACCGATAATAGAAATTGATAATACAAACATATA12.0408163265306123No Hit
GGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTG12.0408163265306123No Hit
TAACACACCATCACATGAGCTACAAAAATAACAAATATTTAACAAAACAT12.0408163265306123No Hit
GCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATTT12.0408163265306123No Hit
AAGCGAACTTCAGTGTAATCTTTAACCTATTAGAGACTGTCTCTTATACA12.0408163265306123No Hit
AAAGACAACAGTGTAAGAATCGGTTCCAAGGGGTATGTGATTTTCATAAG12.0408163265306123No Hit
CAGCAAAAAGCGTGCTTCTCCCTCTCCCTGTTCCCCCTGTCTCTTATACA12.0408163265306123No Hit
AAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAA12.0408163265306123No Hit
GCAAAAGCAGGGCGAGCAGCAGAGACTCCCTGAGCAGGGAGCCAAAGGCG12.0408163265306123No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGCTG12.0408163265306123No Hit
CCTCCTCAGACAGAAAGACCTGGAAAAGGATTAAAAAGCATCTACTGCAC12.0408163265306123No Hit
ATACAAATAAAAATTTTCCAAATTCAAAACAATTGTCTTATAGATTAACT12.0408163265306123No Hit
CCAAACATCATTAAAAAACAAAAAAAGCTCTAACACAGTACCAAAGTAAA12.0408163265306123No Hit
AAAATAAAAATAAGTTAACATAAAGTACTAAGATCTAATCCATTAACGCA12.0408163265306123No Hit
CTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAGCGCGAAGTAGGT12.0408163265306123No Hit
AGCAAGCAAACAAAGATAAGAAACTTCATTCGGCAAACGAACTGACACAT12.0408163265306123No Hit
ATGTGGAGCCCAAGGTGGGGCTTGATCCTAGCACCCTGAAATCATGACTT12.0408163265306123No Hit
GGAGGAGCTTCGGAACTTAATAACTTAACTTTGGTTTACTCAAGATCTCG12.0408163265306123No Hit
CATCAACTTGCAATTCACATTTGACACTGCATTTTAAAATCACCACAATA12.0408163265306123No Hit
TGTTCAGACTATGTACAAATCCTCAGAATATAAAAAAAAAAAAAAATCTC12.0408163265306123No Hit
ATTCCAACCTGAATGATGCCACATATCAGAGAACAAGAGCGCTTGTTCGC12.0408163265306123No Hit
AATAAGCAAAACAAGAGAAGAAAAAAGCAAACAGAAATAAGTCTATATGT12.0408163265306123No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG12.0408163265306123No Hit
ATAATAAAAATTCAAATTAAGCATAGTCTCATTACATACACACCAAATGA12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)