FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_E7_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_E7_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAACATCTAATCACATTTTATTATCATAACAAAAAGTCATTAAAATTTA13.8461538461538463No Hit
GTTCGGTCCCCGTGGGATTTCCAGTCCTGCAGAGCCTGCTCACACTGGAC13.8461538461538463No Hit
CCCAAATCCTGAGATGAAAACTCATTTTCCACAAATAAGACAACACATAA13.8461538461538463No Hit
ATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCCTG13.8461538461538463No Hit
AAAGAACAAAGTACTGAAAGAGAACTTCAGAGTAATCTTTAAACGATTAG13.8461538461538463No Hit
GTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGATCAGCACTGGAG13.8461538461538463No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTAC13.8461538461538463No Hit
GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTCTGTCTCTTA13.8461538461538463No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCATGGCCCAGCATT13.8461538461538463No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA13.8461538461538463No Hit
GAGAAGGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAA13.8461538461538463No Hit
AATTATTACCATAAAACAAAAAACAAAAAGAACAAATCATGAAACACACA13.8461538461538463No Hit
CCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACCTGTCTCT13.8461538461538463No Hit
GTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAA13.8461538461538463No Hit
CCCCTTCCCTGCATCCCTCTCCCAACTTCTGATTGACTACCATCTCTGTC13.8461538461538463No Hit
GAGCAAAAGCAGGTGTGTCATCAACCTTCCCTTTCATGATCTGTCACTTA13.8461538461538463No Hit
AGTAGAAACAAGGAACGGGAATGTTGTTACATATGTGTCTTGCTCTGACA13.8461538461538463No Hit
GACAAAAAAACACATAATCAGAATATATACACTGCCCTAATGAGAAAATA13.8461538461538463No Hit
ATCAATTACACAAATAATTTGTCTGTGAATGTAACATATAACATAAAAAA13.8461538461538463No Hit
ACACTAGGCTGCTATCCCGAGGTCAGTAAGGGAAAGTGAGATGGGAGGTC13.8461538461538463No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATT13.8461538461538463No Hit
GGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAA13.8461538461538463No Hit
AGTAAGTACAAATGCTACAAAAAACAACAATAAGGGACATGCAAATAAAA13.8461538461538463No Hit
GATCCAAAAAGGAAGACTTTGTGCGACAAATCTTCAATCCAATGATCGTC13.8461538461538463No Hit
GACCCAAGCTGAAGGCAGATGCTTGCTCAGGCACCCCTGTTTGTACCTCG13.8461538461538463No Hit
TTATTGTTCTTTCTCCCCAAAGTAGTCTTTCCTGATGTCTGACTGCTCCT13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)