FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTGAAACAAACCAGACACAGAAGGACAAATACTGTCCCTGTCTCTTAT21.9417475728155338No Hit
GTCCGTGTGGCATCTGCCTTTAGATCAGGTCATGATTCTGGGGTCCTGGG21.9417475728155338No Hit
ATCTCAGGGTCCTGGGATGGAGCCCCGCATCAGGCTCCTTGTCAGCAGGA21.9417475728155338No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAAC21.9417475728155338No Hit
GCCCATCCATTTCCCAGAAGACACAGAAGAGAGTTGAAACTCTTCCCCTT21.9417475728155338No Hit
ATCTTGGCTTTGAGGGGGCCTGACGGGATGATAGAAAGAACGTACGTTTC10.9708737864077669No Hit
AGCGAAAGCAGGGCGAGCAGCAGAGACTCCCTGAACAGGGAGCCCAAAGC10.9708737864077669No Hit
GCTCAGCGGGGAGCCTGCTTCTCCTCCTCCCACTCCCCCCTGTCTCTTAT10.9708737864077669No Hit
CCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTAGGGTAATGAACTG10.9708737864077669No Hit
GTTAAATACATATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAA10.9708737864077669No Hit
GTGCTCATTGGAGCATTTAAAAAATGGAATAGGGTGCCTGGGAGGCTCAG10.9708737864077669No Hit
ATGCTACACGATGCTGGGTGTTCAGGATACAAAATCTGGTTCCTGTTTTC10.9708737864077669No Hit
CTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCA10.9708737864077669No Hit
CCTTTGTGATCCTAAGTGGTGCCTAGTTGTTCTGTATGACTCTCACCTGG10.9708737864077669No Hit
GAATTAAGAAAAAGGTCATGTACAGTTGCTTTCCCTTTTCACTGAGTAAT10.9708737864077669No Hit
CGCCGGAACCCAGCCACTGCTGAATTCCCAGATGATGACGAGATGCCAAT10.9708737864077669No Hit
ATTCGACAACTAATTGATAGCCATCCGAACTCTTTTATTCTCTCCATATT10.9708737864077669No Hit
TGTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCC10.9708737864077669No Hit
ACTCAATACAGTACTAATTTGCTTATTTTTTCGTGATCTGCCCATTATAG10.9708737864077669No Hit
GTATTAGACTAATACCTTAGAAATTATGAAAAGTGGGACACTTGGGTGGC10.9708737864077669No Hit
CCACTGAGCCAGCAGCCGTCAGTGTGGTCCCATTCTGGAGGCCTTCATGC10.9708737864077669No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCGG10.9708737864077669No Hit
CTTTACCGACCGAGCCACCCAGGCACCCCTGCAGCAAACTTCTATATCTC10.9708737864077669No Hit
TCTGCCTTCAGCTCAGGTCATGATCCCAGGGTCCTGGGATGTAGCCCTGT10.9708737864077669No Hit
GAGGTAACTATGTGGCCTAGGATCTAAGATGCCAACGACCGGACCATTTA10.9708737864077669No Hit
AAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTT10.9708737864077669No Hit
CATTATGTATAGGTTATCATGCGAACAAGTCAACAGACACTGTAGACACA10.9708737864077669No Hit
CATCTGTCTTCACAGTAAAAGTGGCTTTCTGGACGACGGCACTGGGTGGT10.9708737864077669No Hit
AGACAAAAGCCAAAACCCAAACCTGGCCACCTATTCCCACAGGAGCGGGG10.9708737864077669No Hit
GCATAGGGTCCCTTCTGACAGGAAAAGAGGTCTCCAGGTCAGAGCCGTCA10.9708737864077669No Hit
CCAGGAGATTGATCCAGTTGATAGTAAGCGGGAGAGACGAGCAGTCAATT10.9708737864077669No Hit
AATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGA10.9708737864077669No Hit
GGTCTTAACATACAAATGGGAAAACCAAGATCCCGAGCCACTGTCTGCAT10.9708737864077669No Hit
GTATTAGTATTTTGGGGGGGTGTGATTAGGAAACCATTTTCTGAAAATGT10.9708737864077669No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC10.9708737864077669No Hit
GTTGTTTATGCTAATCCAAGCTCCCACTTTAAACATAATCTTTCTGCCTG10.9708737864077669No Hit
CATATGCATTTGACAAAAGAACTACTGATGGAGTGTTATTACTGTCTCTT10.9708737864077669No Hit
TGCCACAGCAGTAAAATGCCCACAACATTCACACATTTATGATCATTTTG10.9708737864077669No Hit
GCAGACTCCAACCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACC10.9708737864077669No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG10.9708737864077669No Hit
GTATATAACTAATGAACCACTGAAAACTACATCAAAAACTAATGATGTAC10.9708737864077669No Hit
GGTCTAAATTTGAATATAACTACAAATAAGTGAGATCTGTGTGTAGTTTA10.9708737864077669No Hit
TCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATCTGTCTCTTA10.9708737864077669No Hit
TCCCCGACCTGAGGCCACAGGGAAGCACTTCGGGGCTCTGACCTCCAGGG10.9708737864077669No Hit
GGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCG10.9708737864077669No Hit
GGGAAATGCACCGTGCACGTGGGACAGGCAGTACGTGGAGTCGAGGATTA10.9708737864077669No Hit
ATCAACTTGCTTGTCAGTGTTGTCACTGGATTTTTACATCAGGTGATTAC10.9708737864077669No Hit
TTAAATATCTTCCTCGTCAACAACACTGGTAATCCTACTCCTGTCTCTTA10.9708737864077669No Hit
GAACATTTACCATATGTATGAGTTACTAATTTCCTGGACATTATCAGCCA10.9708737864077669No Hit
CTACAAATGGACGAGGCTCAAGGATCGGGTCCTGAGACCACCAACATCAG10.9708737864077669No Hit
TGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTC10.9708737864077669No Hit
GTCCTGAGAAGAACTTTGATCAAGAAGGACTAGTGGAACACTGCAAGTTA10.9708737864077669No Hit
GCAAAAGCAGGGGGAGAGGCAGGCAGAGGGAGAAGCAGGCTTCCCACTGA10.9708737864077669No Hit
CAATGAACTTATTCAATTCAATAGTGGCACAGTACCTGTCTCATATACAC10.9708737864077669No Hit
GCGTAGGTGCGCAGTAAATAGGTGTTGAATAAATGAATGAATGTCGGGTC10.9708737864077669No Hit
GAGCGAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAATTCG10.9708737864077669No Hit
GAGTAGCAGACAGAAGGAGAGGGAGAAGCAGGCCTCCCGCTGAGCAGGGA10.9708737864077669No Hit
AAAAAGAAAAAGAAACTAAAAAAAATGAATCAACAAAGATTTACCAAAAT10.9708737864077669No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC10.9708737864077669No Hit
ACAATAATCACCTGATGTAAAAATCCAGTGACAACACTGACAAGCAAGTT10.9708737864077669No Hit
ACTTCTGGACCTCACTGTGGTCATTATGTTGACAGCCTTGTGACGCTGAC10.9708737864077669No Hit
TTGCAGAACATGTAAAGGTACAGAAGTGAGCACACGCGAAGACCATTCAG10.9708737864077669No Hit
CCACCCACACCAATTGACTCTTGTGAGCTGGGTTTTCATTTGGTCTCATC10.9708737864077669No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT10.9708737864077669No Hit
ATGATATAGAATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTT10.9708737864077669No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG10.9708737864077669No Hit
ACTATATTCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAG10.9708737864077669No Hit
GGTGCAAGATCCCAATGATATTTGCTGCAATGAAGAGAGGATCACTTGAA10.9708737864077669No Hit
AGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAACTGAG10.9708737864077669No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA10.9708737864077669No Hit
CGCCTGGCGTCTTCAGCAAGCTGGACAGCCTGCTGCTCCTGGATCTCCAG10.9708737864077669No Hit
AGTATCTGCCTTCAGCTCAGGTCATGATCCCAGGGTCCTGGGATCGAGCC10.9708737864077669No Hit
GTTTATAGATACACATCCAGAAAGACTACTTGTGTCAACTCCATTTCTTC10.9708737864077669No Hit
CCAAAACCCTGGGATCATGACCCGAGCCAAAGGCAGAAGCTTAATGGCTG10.9708737864077669No Hit
ACATAATGGCATACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAA10.9708737864077669No Hit
GGGCCAAGGGGATGTGGGGGTAAAAGACAGAAGGTAGAAGGAAAAAAGGA10.9708737864077669No Hit
ACTAACCCCTTTTAGCTTTAGTAGGCTCATCTGTGAAATGGAGATGATGT10.9708737864077669No Hit
CTTCACATTTGAATCGTGGTAGTCCAAAGTTCTTTCATTTTCCAATAGAA10.9708737864077669No Hit
GGTCCTGAGATTGAGCCCCATATCCATCTCCCTGCACAGTGGGAAGCCTG10.9708737864077669No Hit
GGGTAGGAGCGGTGGCCACTTCCCTCAGAAACTGTCGATGCCTCTCAGAA10.9708737864077669No Hit
TCTCTTGCCTTCCTGATGCGTACTTTTTGATTATGGCCATATGGTCCACA10.9708737864077669No Hit
ACTTATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA10.9708737864077669No Hit
GTCTTAGCCAAGTCACTACACCACTATTTTACTTTTTACACATTTGCCAA10.9708737864077669No Hit
GTAAAGCTGGAATCAACAAGGATTTACAAGATTTTGGCGATCTATTCAAC10.9708737864077669No Hit
GCACACATGGTCCAAACTTCCACCATGCCAATAGCTCTAGGAACAACTAC10.9708737864077669No Hit
AATAGGTACAGAGTTTCTGTTTGACAGGGTGAGGACGCTCGGGTGGATGG10.9708737864077669No Hit
CTCCAGCCATGAACGACTATCTAGATGACCATTTCTCTTTCTCTCTCTTT10.9708737864077669No Hit
GCTCAGTTGGTTGGACGACTGCCTTCGGCTCAGGTCATGATCCCGGAGTC10.9708737864077669No Hit
GTAAAAAAAAGCAACAATTAATAATAAAATTAAGAGAACAACATCAGATA10.9708737864077669No Hit
GTGGAAGGCTTCTGCCAGATTATCTAACGTCAGTTTGTTTCCTGACAGTT10.9708737864077669No Hit
ATATATGACAGAGCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGT10.9708737864077669No Hit
GAGGTGAGGTTGCTGCGTCCTCACAATCTGGCTCTGGAAGTAGTCAATGA10.9708737864077669No Hit
TTCTTAAGACTGACCTATGTTGCCAATTATATTTCTAATGCTGTCTCTTA10.9708737864077669No Hit
ACACAGGACTCAATCCCAGGACCCTGGGATCATGACCTGAGGTGAAGGCA10.9708737864077669No Hit
CCGTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTT10.9708737864077669No Hit
CTTAAGGACTGAGTCACCCAGCTGCCCCAGTTTTTTTTAAATTTTAATTC10.9708737864077669No Hit
GGATAATGTTGCTACCAGGATAAATGGCGCAGGGCAGGAAATGAGCTGTC10.9708737864077669No Hit
ACAAGCAGTGAGGAGCAAACATAGACAATCTGGCCAGAGAGTGGAGTGGG10.9708737864077669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)