FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D6_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D6_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1176
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG50.4251700680272109No Hit
GTGCAAGGAAGACAGTGCTCGTTTTCTGCCCTCATGGCCTCCCTCGCTTC30.25510204081632654No Hit
GTTCGCAAATGATATCCTGTGAACCAAAAATAACCTACCTGTCTCTTATA30.25510204081632654No Hit
ATTATGTCATTGGTGGGACTGTAATTTGATAGCTGTCTCTTATACACATC30.25510204081632654No Hit
GTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTT30.25510204081632654No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA30.25510204081632654No Hit
GTTAGGATGTGGCATTGCCTAGAGAGAGAGCTGTCTCTTATACACATCTC30.25510204081632654No Hit
CCCTAAAATAATGCTTTGTTTAGGGCGCCTGGGTGGCTCAGTCAGCTAAG30.25510204081632654No Hit
GTTCAAGGACAACAGAGTTTCACAAGATGAAAAAGTTTTGGAGGTTGTAC30.25510204081632654No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT30.25510204081632654No Hit
GACTTCAGATAGGTAAGTCTCCATGAATGATGTCCAAGTCAGTAGTTCAA20.17006802721088435No Hit
GTTCCAAATGCTTCATACTGAGAAGAAACACAGGCAGCTGGCCTCGCTGG20.17006802721088435No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC20.17006802721088435No Hit
CCACATCCCCTTGACCCCCATTTGCTGGCAGGATTGCACAGTGGTTCCGA20.17006802721088435No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.17006802721088435No Hit
GTGTATACATACAATGGCATATTACTTGGTCTTCAGATGGATGGAAATCC20.17006802721088435No Hit
TCTCCGAGAAGCTGCTAATATGAACAAGGGTGCCTGTCTGATGAGAAAAA20.17006802721088435No Hit
GCCAGGAGCACCCTCCGGCCTCCTTCCTCATCCGCAGTCTTCTCTTGAGT20.17006802721088435No Hit
TCATAGAACAATTAATCCCAATTATACCTAACCACAGACTGGAATTTCCT20.17006802721088435No Hit
CTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTG20.17006802721088435No Hit
GTTAATTATCCGATGTAAAGACAAGTGGGTAGCGTATAACACAGCCTGTC20.17006802721088435No Hit
CCCTCATACTGCAGCTTCTGTTTCCCTGCAGGCATACCCGTGGCTTCGTG20.17006802721088435No Hit
GATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAACTGCTGAGTCACT20.17006802721088435No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT20.17006802721088435No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA20.17006802721088435No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA20.17006802721088435No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAA20.17006802721088435No Hit
CCCGTGGGAGGGAGGCCTGAAGGGCAGAAACTCGGGGACAACTTTCTCTG20.17006802721088435No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCC20.17006802721088435No Hit
GCTTCTGCCAGATTATCTAACGTCAGTTTGTTTCCTGACAGTTCTCCGTC20.17006802721088435No Hit
AAATGTAACTTACAGAAATAAAAGCACCAGTATAGTCAATGGTATTACCA20.17006802721088435No Hit
AGCAAATTAAGGAAACTTATACCAAAAGACCAAAACAAAACCTGTCTCTT20.17006802721088435No Hit
GGGTTGTGAGATCAAGCCCCGTGATGACCGGCTCCTCCGTGCTGGGAGTG20.17006802721088435No Hit
GAGCAAAAGCAGGGGAACAGGGAGAGGGAGAAGCAGGCTCCCCGCTGAGC20.17006802721088435No Hit
TCTATCGACTTATTTTTTTCCCTGCTTTTGCTCCTGTCTCTTATACACAT20.17006802721088435No Hit
GAAATCAACCCACACAAGGACCGCCAGCGGATTTTCCACACGGGCCCTAA20.17006802721088435No Hit
CCTCCAGTGCTGATCCTGTTAAAAATAGGACTTGAAATGTCAGAGCAAGA20.17006802721088435No Hit
GATGAATGAGGGACGGACCAGAATTTGTTTAACAGTGGAAGAGCAGCCTC20.17006802721088435No Hit
CAGTTTCCTTTCTGGCTATGGGTCTATTCAGATTTTCTATTTCTTCCTGT20.17006802721088435No Hit
GAGTTAATTATCCGATGTAAAGACAAGTGGGTAGCGTATAACACAGCCTG20.17006802721088435No Hit
GCATTTTTCTCAATGACTTCAGATAGGTAAGTCTCCATGAATGATGTCCA20.17006802721088435No Hit
CTGTTTAGGTGGTGGTGTGTGGGTTGGTTCTGGGCCTGTCTCTTATACAC20.17006802721088435No Hit
GCCTTAACAGAGACCATAAAAGAAAAGCTCAAGGCACTTGAAGACAGAAA20.17006802721088435No Hit
GGCTTGTGGTTGTCTGTACAGGGCCTATAGTATCTGTCTCTTATACACAT20.17006802721088435No Hit
TCTTCAGATTTACCTTGGGGCTTTCACCATCCCCTGCTTTTGCCTGTCTC20.17006802721088435No Hit
GTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCA20.17006802721088435No Hit
GTTCTACCTCTGATTAGTCAGCCCATGGCTTCATGGTCCCAGCTCTGGAT20.17006802721088435No Hit
CATTTGAAGTAGGAACATGCTCTACTAGGTAAACACTGTCTCTTATACAC20.17006802721088435No Hit
CCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTATGAACCATGTTTAA20.17006802721088435No Hit
CCTTAACAGAGACCATAAAAGAAAAGCTCAAGGCACTTGAAGACCTGTCT20.17006802721088435No Hit
CTGCTCTACTTTGCGCGCCTTTGAACATGGGACTTCATCTGACATGAGTG20.17006802721088435No Hit
CACTTTTAACAGAAGAACCTTTGATAACTTGAGAGTAGCTGTCTCTTATA20.17006802721088435No Hit
CATCAATAGCTCTAAGAAGCTCAATGAATTCCACTAAGGGTAAATCTGTC20.17006802721088435No Hit
AAACTGTTCTTCAAAGTTACTAATAGCCTCCCCTTTGCTAAATAAATGGA20.17006802721088435No Hit
GGGTGGCTCAGTGTGTTAAGCCTCTGCCTTTGGCTCAGGTCATGATCTGT20.17006802721088435No Hit
GTCTATAAGTTATGCTGTGCTCAGGAAAAAAGGAGCCACCGTCTGTCACC20.17006802721088435No Hit
GGCCACCACAGGGGAAGTGGGCGAGAGCGAGGGACGGAACGTCAACCGGA20.17006802721088435No Hit
TCTTTACAGTAGCCTTTGAACTTACTTCAGCTCCTGTCATTGTCTTACCT20.17006802721088435No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGCTGTCTCTTATAC20.17006802721088435No Hit
CTAGAGGGGACCACCTCTCCTCCTTGAGGCAAATGCCTCCTATCAGTCCC20.17006802721088435No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAACTG20.17006802721088435No Hit
GTGGGTGGGGCTCGGAGTGCCGAGAAGTGAAGGCGACTGCCCAGCGAGGA20.17006802721088435No Hit
GAGGGGGACCAAGGTCACCACCACACACTGGTGCTGTGTGGGAGGGTGCA20.17006802721088435No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACCTGTCTCTTATACAC20.17006802721088435No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC20.17006802721088435No Hit
GCTTTGAACTACTGACTTGGACATCATTCATGGAGACTTACCTATCTGAA20.17006802721088435No Hit
GAACAGGGATACCATAATAAATAGGAAACACTCGAGGTTCACTACAATTT20.17006802721088435No Hit
TGAGCATTTACATGTGTAATCACCTTCCAGATCATGATATCTGTCTCTTA20.17006802721088435No Hit
CTCTCTGCCCCTCCCCTGCTCATGCTCAGTCTCCCTCTCTCTCAAATCTG20.17006802721088435No Hit
AGTAGAAACAAGGCTGGAGACTGTCGGGGACATGCATCCAGGTAAGACAA20.17006802721088435No Hit
GTAAGCTTTGAACTACTGACTTGGACATCATTCATGGAGACTTACCTATC20.17006802721088435No Hit
GCCTTCAGCTCAGGTTGTGATCCCATGGTCCTGGGATAGAGCCCTGCATC20.17006802721088435No Hit
GGAGAGCACACATCTATGTGGATTCTGCTCTATACAATTCCTGTCTCTTA20.17006802721088435No Hit
GGGCAGCGGCAGGCAGAGGGAGAAGCAGTCTCCCCACCAAGCATGGAGCC20.17006802721088435No Hit
ATTTTGGAAGTTTGGTTGAAGACAGCATGAGTATTAGGGAACAGAACCTG20.17006802721088435No Hit
TTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCATACACAGGCAG20.17006802721088435No Hit
GCCCTGGTGTGTGTTCAGGAAGTAGCACCTAGTCCCCTGCCTTCTAGCAG20.17006802721088435No Hit
TGCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATG20.17006802721088435No Hit
CAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACT20.17006802721088435No Hit
GAAGAAGTAGAGAAGAGAAACTTGCTGTCAGGTCCTGTCTCTTATACACA20.17006802721088435No Hit
CGGTACCCCGAAGAACCCCGAAGAACCCCGCGGTCACCGATCGTGGTTCA20.17006802721088435No Hit
CCGTCGAACTAGGGCGTGGACGTTCCCGGTAGCCTGGGCGCTCGGGATGC20.17006802721088435No Hit
CTTGCACATCTGTATTCCCCTTGGAAAACAAACCCTTTGCACTGTCTCTT20.17006802721088435No Hit
GACTTGGAGATGCTTGTGAGATGGGGCTTTAGAGCTGATTGAAGTCGATG20.17006802721088435No Hit
GCTCTCTGCTGTCCGGCTTCTCCCTCCCTCAGTCTGACACCCAGAGTCTG20.17006802721088435No Hit
TTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCCTGTCTCTTATA20.17006802721088435No Hit
CTTGAATAAGTGGAAGGCTTCTGCCAGATTATCTAACGTCAGTTTGTTTC20.17006802721088435No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)