FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4010
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC180.4488778054862843No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT130.3241895261845386No Hit
ACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTT80.199501246882793No Hit
ACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGT80.199501246882793No Hit
CATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACA80.199501246882793No Hit
GTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTGAA80.199501246882793No Hit
CTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTCAC80.199501246882793No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC70.1745635910224439No Hit
GATAATTAGAGCATTGGTGTCTAGCCCTTTTTTTCAAATGTGTGTTTAAG60.14962593516209477No Hit
ATATTGCACATTTCAAACATGAATCCGTAGACCATTTCCTCCACCTAAGA60.14962593516209477No Hit
CTTTTAGCTTTAGTAGGCTCATCTGTGAAATGGAGATGATGTATGTAAAG60.14962593516209477No Hit
GTTCACATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTAC60.14962593516209477No Hit
ACTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAA60.14962593516209477No Hit
CAATAATGGTCAACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACA60.14962593516209477No Hit
CATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCG60.14962593516209477No Hit
TATCTGAACTCCTGCTGTGGAATGTGTAGCAAGTGAATTAACTAACCCCT50.12468827930174563No Hit
AAACAAGGATTAGCACACAGTCTAGTTAATAAAGCCCTACTATTCCACCG50.12468827930174563No Hit
GTGTACTAGTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAG50.12468827930174563No Hit
CCATTACACAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGA50.12468827930174563No Hit
TAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAAAAGGC50.12468827930174563No Hit
GTCTTAGCCAAGTCACTTCACCACTTTTTGACTGTTTACTCATTTGCCAA50.12468827930174563No Hit
CACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTC50.12468827930174563No Hit
GAATTACTTTACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGC50.12468827930174563No Hit
CCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCGACTAA50.12468827930174563No Hit
GTGTAGCAAGTGAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTG50.12468827930174563No Hit
CCTTTAGCCTAGGGGTTAAAGGTATGAGCATATCTGAACTCCTGCTGTGG50.12468827930174563No Hit
CATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGTTAGTT50.12468827930174563No Hit
GAGTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGTTTG50.12468827930174563No Hit
AGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAGAACT50.12468827930174563No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)