FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D4_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_D4_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1430
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT60.4195804195804196No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC50.34965034965034963No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC50.34965034965034963No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC50.34965034965034963No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT50.34965034965034963No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAA40.27972027972027974No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA40.27972027972027974No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA30.2097902097902098No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG30.2097902097902098No Hit
GCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGA30.2097902097902098No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT30.2097902097902098No Hit
ATTCTGGACTGAGATTAGTCTAGAGCTGAGAACAGGCTGTCTCTTATACA30.2097902097902098No Hit
ATTGTACCCATGAAAAAGGAGCAGTCAGACATCAGGAAAGACTACTTTGG30.2097902097902098No Hit
TGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACACTGTCTC30.2097902097902098No Hit
GAGCAAAAGCAGGATGAGAGACAGATTTCTGTTCCTTACGCCTTTAGAAT30.2097902097902098No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA30.2097902097902098No Hit
GAGCAAAAGCAGGCAGAGTGGGAGAGGGAGAGGCAGGCTCCCGCTGAGCA30.2097902097902098No Hit
AGCGAAAGCAGGGGGAGCAGCAGGCAGATCAGGCCTAGGGGGAAGCAGGC30.2097902097902098No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGCCTTCCTGATGTGTA30.2097902097902098No Hit
CTCGATCCCAGGACCCTGAGATCATGACCTGAGCTGAAGGCCACCTGTCT30.2097902097902098No Hit
TTTCTACCTTGCCTATTCAGGGAGTCCTCACCACGTCTAACCTCTCAAAC30.2097902097902098No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC30.2097902097902098No Hit
GTTTAGCATCTCATCTCCCTTCAGCTCAGGGTCCTGGGCTGTCTCTTATA30.2097902097902098No Hit
GACCTGGAGTGACCAGGACCAGCAGCTGGCGAGTCACTGCTGATGGCAAA30.2097902097902098No Hit
AGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCG30.2097902097902098No Hit
CCCCAGAGAAAACAGTTCCTGCTGCATTATTGTATGCCCGCTGTGCCAGG20.13986013986013987No Hit
CTAATTGATGGCCATCCGAATTCTTTTGGTTGCTGTCTGGCTGCTGTCTC20.13986013986013987No Hit
ACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGG20.13986013986013987No Hit
CCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTG20.13986013986013987No Hit
GCGAAAGCAGGGTAAGGGTAGAGGGAGAAGTGGGCTGTACTTTCTTTTGT20.13986013986013987No Hit
GTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTCTGTCTCTTATAC20.13986013986013987No Hit
TGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGT20.13986013986013987No Hit
GTCTATTGATGAGTAAGCGACTAGGCATATGCATGGTATAGATCTGAGGT20.13986013986013987No Hit
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGCTGTCTCTTATACAC20.13986013986013987No Hit
CTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAA20.13986013986013987No Hit
GGGACATGCATCCAGGTAAGACAATGACAGGAGCTGCTGTCTCTTATACA20.13986013986013987No Hit
GCTCGGTTGTTAGACTCAGGTCATGTTGGCTCAGGTCATGATCCCAGGGT20.13986013986013987No Hit
GAGCAAAAGCAGGAGGAGTGGGAGAGAGGGAGGCACGCTTCCTGCTAAAC20.13986013986013987No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTTCTTTGGCATATCC20.13986013986013987No Hit
CTGGTTTGCTAATCTTGTTTTTTTGCATCATCAACTTGCTTGTCAGTGTT20.13986013986013987No Hit
GTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCCTTTATT20.13986013986013987No Hit
TCCGTGGACAGCACCATCTTACATCCAACAGCTCAAGTCTGAACCTTGGG20.13986013986013987No Hit
GTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAG20.13986013986013987No Hit
ATATGGTACATGAATTGTATCAGTAAATTTGTTGAAATATAGTATCTGGC20.13986013986013987No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCTGT20.13986013986013987No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG20.13986013986013987No Hit
ATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTCTGCTCTGGAGGTAG20.13986013986013987No Hit
CATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGCTG20.13986013986013987No Hit
GAGCAAAAGCAGGGGGAGTGGGAGAGGGAGAAGCAGGCCTCCCACCTGTC20.13986013986013987No Hit
TGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCACTGTCTCTTATACA20.13986013986013987No Hit
GATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGA20.13986013986013987No Hit
ACCTTGTGAGCTCTGGTTAAACTGTGTCAACTTTCCATTGGTAGTTCAAG20.13986013986013987No Hit
CTTCAGCTCCTGTCATTGTCTTACCTGGATGCATGTCCCCGACAGTCTCC20.13986013986013987No Hit
GTTCCACCATTGAAGAACTCAGACGGCAAAAATAATGAATTTAACTTGTC20.13986013986013987No Hit
ATATATGACAGAGCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGT20.13986013986013987No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGCTGTCTCTTATAC20.13986013986013987No Hit
GGGGAAGGAGAAGCAGGCTCCATGTTGGGCAGGGAGCCCGATGTGGGGCT20.13986013986013987No Hit
TAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGC20.13986013986013987No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA20.13986013986013987No Hit
ATCAAGACTTACCTCAGCATTTGCTGGGACACAGGCTGTCTCTTATACAC20.13986013986013987No Hit
TTTTTTTGCCTTCTCATATCTCAAGAAATGTGTCTATATGGCACCAACTT20.13986013986013987No Hit
GACCCTGGGATCATGACCTGAGCTGAAGGCTTAACCAACTGCTGTCTCTT20.13986013986013987No Hit
GAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAA20.13986013986013987No Hit
ATATAGCCCCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTG20.13986013986013987No Hit
TGCCTGGGTGGCTCAGTCAGCTAAGCGACTGCCTTCGGTTCAGGTCATGA20.13986013986013987No Hit
GATTAATGATCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCC20.13986013986013987No Hit
GTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTC20.13986013986013987No Hit
GAGCAAAGAGCCCGATGCAGGGCTTGATTCCAGGACCCTCAGGTCACGAC20.13986013986013987No Hit
GTTCTCCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTC20.13986013986013987No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA20.13986013986013987No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA20.13986013986013987No Hit
GGTCATGATCTCAGGGTTCTGGCATCGAGTCCCACATGGGGCTCCCTGCT20.13986013986013987No Hit
CACCTGGGTGGCTCAGTTGTTAAGTGTCTGCCTTCAGCTCAGGTCATGAT20.13986013986013987No Hit
GACAATCGACTGAGCCACCTAGTTGCCCTGGTTAATCTCTGTCTCTTATA20.13986013986013987No Hit
GCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATCTGTCTCTTATA20.13986013986013987No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCACTGTCTCTTAT20.13986013986013987No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG20.13986013986013987No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCTGTCTCT20.13986013986013987No Hit
CTTTCCTTCCTTCTGGATTCCAGTTATACCAAATGATAGGTCTCTTGATG20.13986013986013987No Hit
GAGCAAAAGCAGGTATGTAAGTGATAACTTCCTAGGTTCAAGATCCTGTC20.13986013986013987No Hit
GGACTACCACGATTCAAATGTGAAGAACTTATATGCTGTCTCTTATACAC20.13986013986013987No Hit
GGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAG20.13986013986013987No Hit
CAGCAGATCATGACCTGCGCTGAATCAAGTCAGACGCTCACCTGACCCAA20.13986013986013987No Hit
GTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTA20.13986013986013987No Hit
CCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAA20.13986013986013987No Hit
AGAGAAAAGAGAGAAAAGGCAAGAAAGAGAAGATGGACCAGTATTAGGGA20.13986013986013987No Hit
ACCCTGATTCGGGGCTTGATCCCAGGACTTTGGAATCATGACCTGAGCTG20.13986013986013987No Hit
AAATTGTATAGCCTTAAACACACATTTGAAAAAAAGGGCTAGACACCAAT20.13986013986013987No Hit
GCTCTAAGAAGCTCAATGAATTCCACTAAGGGCTGTCTCTTATACACATC20.13986013986013987No Hit
CTCTTTTCCTGCATGTTCTTAGGGCCCGTGTGGAAAATCCGCTGGCGGTC20.13986013986013987No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA20.13986013986013987No Hit
GCTGAAATCAAGGGGGTTGGATGCTTAACTGACTGAACCACCCAGGAGCC20.13986013986013987No Hit
GACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTCTGTCTCTT20.13986013986013987No Hit
CTCATACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATG20.13986013986013987No Hit
CGTCTTTACAGTAGCCTTTGAACTTACTTCAGCTCCTGTCATTGTCTTAC20.13986013986013987No Hit
GCCATGGAACAGGAACAGGATACACCATGGACACAGTAAACCTGTCTCTT20.13986013986013987No Hit
GAGGAAACTGAAGGACCAGTAAATCACATTCTGTGATGCTCATGTCCTTT20.13986013986013987No Hit
GGGTAATATCCGTAGGGCATGATTTATCACTAGGGCAGGTCTAAATTCTG20.13986013986013987No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC20.13986013986013987No Hit
CTATTGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTT20.13986013986013987No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCCTGTCTCTTATAC20.13986013986013987No Hit
CAGCGGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCA20.13986013986013987No Hit
GAGCAAAAGCAGGGGGAGTGGGAGATGGAGAAGTAGGCTTCCCGCTGAGC20.13986013986013987No Hit
GTGCATGTTATAAAAGAAGTCAAAGGCGGTCTTGAATAAGTGGAAGGCTT20.13986013986013987No Hit
GTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGATTCATGCTGTCTCT20.13986013986013987No Hit
GCTTGGGCTTTGACTCCTCAATGAGGCAACACCCCAAGCAGACACCTTCT20.13986013986013987No Hit
CCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTAGTCT20.13986013986013987No Hit
GTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCT20.13986013986013987No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC20.13986013986013987No Hit
TTTCCCTTACTGAGTTGCAGTGTAATTCCGTAACAGTCTCTGTGCGTGAT20.13986013986013987No Hit
GTTATGAGTACAGTACTGAGTCCTTTGAGTCCCACTGGCAAATCCTAAGA20.13986013986013987No Hit
CATCAATAGCTCTAAGAAGCTCAATGAATTCCACTAAGGGCTGTCTCTTA20.13986013986013987No Hit
CATTTTGATGGGCAGAGAGCCACATTTAACTGGCTCTTGAGTCTTTCTGC20.13986013986013987No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGACTGTC20.13986013986013987No Hit
GATTATGGCCATATGGTCCACGGTGGTCTTAGTGAGTATCTCGCGAGTGC20.13986013986013987No Hit
CTTCTCCTCCTGCCTGCTGCTCTCCCTGCTTTTGCTCCTGTCTCTTATAC20.13986013986013987No Hit
ATACTCACTAAGACCACTGTGGACCATATGCTGTCTCTTATACACATCTC20.13986013986013987No Hit
GCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAAC20.13986013986013987No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCCTGTCTCT20.13986013986013987No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC20.13986013986013987No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA20.13986013986013987No Hit
CCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGAT20.13986013986013987No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG20.13986013986013987No Hit
GTTAGAAGCTGTGCAGCTACAGAGATAAATCCTGTCTCTTATACACATCT20.13986013986013987No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTCTCT20.13986013986013987No Hit
GTTTAACTTCACATGACTGAATTCTAAAGCACTTTCATGATTCTATCTCT20.13986013986013987No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG20.13986013986013987No Hit
ACACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAG20.13986013986013987No Hit
AGTTAAATGTGGCTCTCTGCCCATCAAAATGAACAATGACAGTAATAGCT20.13986013986013987No Hit
GAACGAGAGAATCTCAAGCAGGCTCCCTGCTGAATGTGGAGCCCAAGGTC20.13986013986013987No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)