FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C9_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C9_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGT21.1627906976744187No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATT21.1627906976744187No Hit
TTGTAGAGGGATGTAAAGTTTATAAAATTCTTTTTCATATATTGTCTTAT21.1627906976744187No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC21.1627906976744187No Hit
GGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATG10.5813953488372093No Hit
ATCTTCTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAG10.5813953488372093No Hit
ATAAAAACGAGAAGAAAAAATAAAAATAAATCCAACCTTTGCAAATATCT10.5813953488372093No Hit
TTTCAAACATGAATCCGTAGACCATTTCCTCCACCTAAGACATAATAACA10.5813953488372093No Hit
CAAATAAACTAAATTCATATTAAAAAAGTAATCAAATTCCAATTAAAATA10.5813953488372093No Hit
GTTAAATACATATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAA10.5813953488372093No Hit
GGAATTTCCTTAATAAAATGCATTGTTGCGTTCCTCCAGTGCTGATCCTG10.5813953488372093No Hit
GGGCAGAGCAAGAGGGAGAAGCAGGCTTCCCGCTGAGCAGGGAGCCTGAT10.5813953488372093No Hit
GAGCAAAAGCAGGGTTGGTGTGGGCGTCCCGGGGCAGCTGCTGGGGGTGG10.5813953488372093No Hit
CTTTTATTCTCTCCATATTGGGTATAATTGACCTGCTTTTGCTCCTGTCT10.5813953488372093No Hit
GTCCTGGGATGGAGCCCTGCATCAGGCTCCCTGCTTAGCCAGAAGCTGTC10.5813953488372093No Hit
GCATTTGCTTGATTTTCTAATTATATATTGCTTAATTTTTCAGATGTGCC10.5813953488372093No Hit
GGAGGAGGAGAAGCAGGCTTCCCACTGAGCAGAGTGATCAATGCCTGTCT10.5813953488372093No Hit
GGATATGGGGAGTTTGTGTTTAATGCATACAGAGTTTCAGTTGGGCAAGA10.5813953488372093No Hit
TCCCGGGGCAGCTGCTGGGGGTGGAGTTCTGGCCTTTACTACGTCCGGGA10.5813953488372093No Hit
CATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGT10.5813953488372093No Hit
CCTTAGGGTAATGAACTGTAATTGTTGTTGGGCCAATCCTATTCCACCAT10.5813953488372093No Hit
GATCTGTTTTAAAAGCAAATATGACCTTTAATTTCAGCACCTAGAACAGT10.5813953488372093No Hit
TGCTTGAGATTCTCTCGTTCCCTCTCTCTCTGCCCCTCCCCTGCTCATGC10.5813953488372093No Hit
CTGAGCAGGGAGCTCAATGTGGGGCTCAATCCCAGGAAGGACCCTGGGAT10.5813953488372093No Hit
GGGCTCTCTGCTCAGTGGGAAGCCTGCTTCTCCCTCTCCCACTCCCCCTG10.5813953488372093No Hit
GTCATCCAAATTACCAAAACTAAAACATAAAAATAATATAAACACCACAC10.5813953488372093No Hit
GTTCTATGAAGACAACCTGACAAACAACCCAATTTTCTCTGTCCTAATTA10.5813953488372093No Hit
GTCTATAAGTTATGCTGTGCTCAGGAAAAAAGTAGCTACCGCTGTCTCTT10.5813953488372093No Hit
GTGCACGTGTGTGTGTGTGCACGTGTGTGTATGTGCGGTGGCAAAACACC10.5813953488372093No Hit
GTAAAGACGAAGTAGGGAAGCGACATTCATTCATTTATTCAACAACTATT10.5813953488372093No Hit
GAGCAAGAGATGGGGAAGCAGACTTCCCATGGAGCAAGGAACCCGATGTG10.5813953488372093No Hit
GTTTGGCAGGTAGAATTCAACTGTTGCTTGGTATCTTTTATCGTCCAGGA10.5813953488372093No Hit
CCTAAACGTTCACATGGGTTAGTAGTCCAGGGAGTGAAGTGGGGTTTCTG10.5813953488372093No Hit
GTAGAAACAAGGAAGTCTCCATTTATTTAGCAAAGGGGAGGCTATTAGTA10.5813953488372093No Hit
ATATGACACTACTTACATAAGGTACTTAGAGTAATCAGATTCCTAGAAAC10.5813953488372093No Hit
TCCAAATACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATT10.5813953488372093No Hit
ATCCCATGGTCCTGGGATCGAGCCCTGCATCGGGCTCCCTGCTCAGCGGG10.5813953488372093No Hit
GGCCTGCACTGAGGAAGAAGGCAGAAGACGGAGAACTGTCAGGAAACAAA10.5813953488372093No Hit
AGCAAGGCTCAATCCCAGGACTCCAGGATCATGACCCAAGTTGAAGGCAG10.5813953488372093No Hit
GGTCAAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGACCTAATG10.5813953488372093No Hit
TCATTGCTCTGGTGCAGGGTTCAAGAATTTGCTTTTTGAGGAAGCTCCCA10.5813953488372093No Hit
CTGAGGAACCTCTTTCTAAACCAGTGGTACAGGTACCTGTCTCTTATACA10.5813953488372093No Hit
TAGTCTCCCTGGGGGCAATCAGTTTCTGGACTGTCTCTTATACACATCTC10.5813953488372093No Hit
AGGCAAGAAAGAGAAGATGGACCAGTATTAGGGAGATAACTGTCTCTTAT10.5813953488372093No Hit
CATTTTCTGAGACCTCAAATTGAATGAATACATTTTGTGCTTTTTACTAC10.5813953488372093No Hit
GGGTGGGACCCCGGTGTCCATTTGCCCTGAGAAGAAACAAACACCAGAAC10.5813953488372093No Hit
GCAGAGAGCCCGATGTGGGCCTCCATCCCAGGACCCCGGGATCATGACCT10.5813953488372093No Hit
GTCGTTAACTGTCTGCCTGCCTTTGGCTCGGGTCATAATCCCAGAATCCT10.5813953488372093No Hit
AAATAAAACATTACCATTTTAATATCAATACCAACAAAAATTAAAACAAA10.5813953488372093No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA10.5813953488372093No Hit
ATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGA10.5813953488372093No Hit
GTCACTATACTGTATATATGAAACTAATATCACACTGTATGTTAATTACA10.5813953488372093No Hit
GAAACAAAACCTTTAATTCAAATTTAAATATAAATCCATACAAAAACATA10.5813953488372093No Hit
AATATCACAACTTTCATAAACAATATTAAATATCAAATAAAACTAATAAA10.5813953488372093No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT10.5813953488372093No Hit
GCACCTACTCTCTGCCAGGCACTGTTCTAGGTGCTGAAATTAAAGGTCAT10.5813953488372093No Hit
TATTAAAGTTTGATAGGAACACCTCATATTTGTAGCTGTCTCTTATACAC10.5813953488372093No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA10.5813953488372093No Hit
CTTAAAAAAAATTATTAAACTTACATATCAATAACAATTTAAAACAGGAT10.5813953488372093No Hit
AGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCA10.5813953488372093No Hit
TTTAAATGCTTGTATTATTCATAGCCACTTGTTATGTGGTGTTTCCTGTA10.5813953488372093No Hit
GGCTTCCCGCTGAGCGGGGAGCCCGATGTGGGGCTCAATCCTAGGACTCA10.5813953488372093No Hit
GTACAAAAAATGAATACATCAACTCAAGAATTTAAATATCTCAAAAACAA10.5813953488372093No Hit
AATATCTTCAAAGAGACTTAACAATATTTATAAAACAGTTAAAAATTCAT10.5813953488372093No Hit
ATGTATACACCATGTTTTGTTTATCCATTCATCATCAGAGCACATTTGGG10.5813953488372093No Hit
GTATTTGTACTGTGACTGGCTCCCTCAGTTGTACCCGCGGTGCAGGACCA10.5813953488372093No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA10.5813953488372093No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTG10.5813953488372093No Hit
AAACAAGGTCGTTTTTAAACAAATCGACAAAAAATGATGGACATCCCAAT10.5813953488372093No Hit
GACAAGTGGTTGGATTATATGGTACATGAATTGTATCAGTAAATTTGTTG10.5813953488372093No Hit
CACCAAAAACCAAGAAGACGAAGAACATTAAAGAAACAAAATTAACTAAC10.5813953488372093No Hit
GTTTATGTTCTCAACAACTGTAAAGAGAGTTAAGGACACATTTAGAGAGA10.5813953488372093No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGCTGTCT10.5813953488372093No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC10.5813953488372093No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG10.5813953488372093No Hit
ACAAGTGTTACAAAAGAATTAAACAAAGAAGCAGAAATAAAAAACCAATG10.5813953488372093No Hit
CGGGAGAGCCCTCCCCATCTGGAGGCCCATCCCACCACTGCCCCACCTGT10.5813953488372093No Hit
CCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGATTCAGCCGAAAAC10.5813953488372093No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA10.5813953488372093No Hit
GTCTTAAGTGTCTGCCTTCAGCTCAGGTCATGATCCCAGGGTCCTGGGAT10.5813953488372093No Hit
ACCATTACCAGTCAATTTTAGAACATTTTCATCACCTCAAAAGGCAATCC10.5813953488372093No Hit
CTCACGTGCTTTCTAAAAACGTAAAACACTCTAGGTGCTGTCATAAGGAC10.5813953488372093No Hit
TTCCAATTGTTAGCCAATTGATGCCATCATGACAAGCACTTGCTGACCAA10.5813953488372093No Hit
GTACGCTAGAGTCCCGTTTTCGTTTCATTGCCATCATCCACTTCATTCTG10.5813953488372093No Hit
GAGATGAAGGCAGACGCTTATCCAACTGAGCCACCCAGGTGCCCCTATAC10.5813953488372093No Hit
CATCCTCACCAGTCTCTGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTAT10.5813953488372093No Hit
GTCCTGGGATCGAGTCCCGCATCAGGCTCCTTGCTCAGCAGGGAGCCTGC10.5813953488372093No Hit
AGCGAAAGCAGGCAGAGAGGCAGGCAGGAGGAAGCAGGGTCCCTGCTGAG10.5813953488372093No Hit
GCTCCCTGGTGAGCAAGGAGCCCCATGTGGGACTCGATGCCAGAACCCTG10.5813953488372093No Hit
CAATAATTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTAT10.5813953488372093No Hit
GGCTTTAACCCACTGAGCCACCCAGGCACCCCTACCCTCTTCCTTTAAAG10.5813953488372093No Hit
GGTCCTAGGACTGGGTCCCGCATTGGGCTCCTTGCTCAGCGGGAAGACTG10.5813953488372093No Hit
CTCCAGGAAGAGTAGATCAGATGGGCAGGTTGGAGATACACTGTGATCTG10.5813953488372093No Hit
ACCATAAATATTGTAATTATTTCCACCTTATAGAAGGATCCTGATCCACA10.5813953488372093No Hit
GTGTATACATACAATGGCATATTACTTGGTCTTCAGATGGATGGAAATCC10.5813953488372093No Hit
CCTTAAGATATTGACATAAACACAGCATCACGTAATCATAATATTATACA10.5813953488372093No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT10.5813953488372093No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA10.5813953488372093No Hit
ATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGAT10.5813953488372093No Hit
GAGCAGGGTGATCAATGCAGGGCTCAATCCCAGGACCTGTCTCTTATACA10.5813953488372093No Hit
TTTTGTTTTACTATTAACTTAGAAGTTTTTTGGTCAGTTTCTAAATACAT10.5813953488372093No Hit
GATTCGAGCCATGCCAGATATCCCTGCACACACATGTGATTTCACAAGAA10.5813953488372093No Hit
CTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAGCCTGTCTGTGGGGTG10.5813953488372093No Hit
ATTGTTAAGAGGTCTATACTACCCAAAATCTACATCTGTCTCTTATACAC10.5813953488372093No Hit
CCACTTACCTAAAGTCTTGCTTTATAATCAGTTCTCCATCTCAATATTGC10.5813953488372093No Hit
GCCCTGGGGGGACCCCAACTACCGCAGCGCCAACTTCATAGAGCACATCC10.5813953488372093No Hit
GTCGTAATACCTGTTCCTCAGGGTGGCTGAGAAGATTGAATGACATCAGG10.5813953488372093No Hit
GTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA10.5813953488372093No Hit
GAGCCAAAGGCAGATGCTTAAGGACTGAGTCACCCACTGTCTCTTATACA10.5813953488372093No Hit
CCACTGCAGTATAAAGTCCCGCCCAAAACTGTACCACAGAAAGAAAGCTG10.5813953488372093No Hit
CAACAGAGGAATGCTCTTTAAAAAAAAAAAAAAGGCAAAAAGCTTGCTGT10.5813953488372093No Hit
GTCGGTTAAGCGTCTGCCTTCGGCTCAGGTCATGATCCCAGGGTGCTGGG10.5813953488372093No Hit
ATAGAGCAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCAT10.5813953488372093No Hit
GCCCTGAACCACTAACTTACCCCCAGGAATCTGGTCCTTATGACAGCACC10.5813953488372093No Hit
TCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCCCCAAGATCGAA10.5813953488372093No Hit
CCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTGCCTGAACA10.5813953488372093No Hit
TCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCT10.5813953488372093No Hit
GCACTGGACTCCTTGCTCAGCGGGGAGCCTGCTTCTCCCTCTGCCTCTGC10.5813953488372093No Hit
CCCTTAACTGATTGAGCCACCTAGGCACCCCATTTGGCTAGTATCTTGTT10.5813953488372093No Hit
ATTATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.5813953488372093No Hit
GGCCGTAACATGGTGGAATGGGACTGGCCCAACAACAAGTACCTGTCTCT10.5813953488372093No Hit
CAAAGGAAATCATCTAACATAAATCTATTAAAAACACAATTCAACAACAA10.5813953488372093No Hit
CCCTAGCTAGGATCATGACCTGAGCTGCTGCCAGACAATGACTGCGCCAC10.5813953488372093No Hit
GCACTCCTCACGGCGGCGACCGCTCTGGAAAACCCCGCTGTTCTCCCCGA10.5813953488372093No Hit
ACTCTACCTCCACACCCCCAACCCCAGCATGTTCCTGCCCAAGGGCCTGT10.5813953488372093No Hit
GAGCAAAAGCAGGGGGAGTGGGAGATGGAGAAGTAGGCTTCCCGCTGAGC10.5813953488372093No Hit
GTGGAATAGTAGGGCTTTATTAACTAGACTGTGTGCCTGTCTCTTATACA10.5813953488372093No Hit
GTATAATCCAGTGATTAGACAAGTCTATAAGTTATGCTGTGCTCAGGAAA10.5813953488372093No Hit
CTCTTAGTTACAGGAAACCAACTGAGGGTTGCTGGAAGGGAGAGGGGTGA10.5813953488372093No Hit
GCCCTAGTGATAAATCATGCCCTACGGATATTACCCTAGTAAAATCAGAA10.5813953488372093No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAATTCG10.5813953488372093No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTGCCATCATCCACTTC10.5813953488372093No Hit
ATTTGTTTCAGCAACATAAACATTTTGCTTCTCTTTTGACAAATAATCTT10.5813953488372093No Hit
GCAAGGAGCCTGGTGTGGGGCTTGATCCCATGACTCTGGGATCATGACCT10.5813953488372093No Hit
GAATCGGTCTATTCTCAACACAAGCCAAAGGGGAATTCTTGAGGATGAAC10.5813953488372093No Hit
AACAAAACAAGGGGCGCCTGGGTGGCTCAGTCGGTTAAGCTGCTGCCTTT10.5813953488372093No Hit
GGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTAGG10.5813953488372093No Hit
ATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGT10.5813953488372093No Hit
CCCAACCCATTGTCTGCAAATCGCTTGCGGATATGCCAAAGGAAACCTGT10.5813953488372093No Hit
GTAGCAAGTGAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTGTG10.5813953488372093No Hit
CCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAG10.5813953488372093No Hit
CTTTTATCTCCTTTAGGTCTTTGTTCATACTTCCCTCTATCTTGAACTGT10.5813953488372093No Hit
CCATATAAATCTAAAGTTATAAAAATTCAATACTAACTACATTACTTAAT10.5813953488372093No Hit
GATCAGATCATTCGTCAACTCATCACTCACCAGTGGTGTCTGTCTGTGAA10.5813953488372093No Hit
GCATATCAATGTCACCATTCAAATGATTCTGCCAAACAAACCAACTGAAA10.5813953488372093No Hit
ATACTAATGTTGTGGTCCAGAGAGCACACTTTAAGAACTGACCTAGATCA10.5813953488372093No Hit
CTCCCAGACTCACCGACAGCTGAAGGAGACGCTCTATGAGATCATCATAG10.5813953488372093No Hit
CTGAAATCCTAATGTTAAATACATATTCTAAACTGTAGAGACCCATTAGA10.5813953488372093No Hit
TACAAATTCATTTCCAAACTCAAATCTGAAATTTGTTATCAAAATAACAA10.5813953488372093No Hit
GAAACAGCATCGAAAATAAATCTCCAAAGACTTTGACCATGATCAAACCT10.5813953488372093No Hit
GTTAACGACTGAGCCCACCCAGGCGCCCTGTTATGTGTCTGTCTCTTATA10.5813953488372093No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA10.5813953488372093No Hit
ACTTAATAGAATATCTAAACTAATGCACTAGAATGATAACCAAGTAAATA10.5813953488372093No Hit
CCTTTATGGAGCTTACAGTCGAGCGAGGGAGGCAAACGTTAACGTAATTA10.5813953488372093No Hit
TACATTAATAGTACTATTTTAATATGGAAAAAAACTCCACAAACGAAACA10.5813953488372093No Hit
GGTGGTGATTCCGGGGTCCTGGGATTGAGTCCTGCATCGGGCTCCCTGCT10.5813953488372093No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA10.5813953488372093No Hit
GAGCAGGGAGCCCAACTCTGGGCTCGATTCCAGGACCCTGGGATCATGAC10.5813953488372093No Hit
GTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAAC10.5813953488372093No Hit
GAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGTATATA10.5813953488372093No Hit
GGGGAAACAGGCTGATGACATATTTTAGAGTGGAATACAACATTCCACGC10.5813953488372093No Hit
GTACGTTAGGAGTCTTTCCAAGTTCTTTTTTGTGTGTCCTTTAACTAGTT10.5813953488372093No Hit
GTTAAGTGCATTCATTGTTGTACAACCTCCAAAACTTTTTCATCTTGTGA10.5813953488372093No Hit
GAGCAAAAGCAGGGACTTTTGGGCAGCATTAAGATGTATGAGGTGTATTC10.5813953488372093No Hit
CATCCCAACTGTAAAATATGGTTAATAATAGTATCTTCTTCCTGTCTCTT10.5813953488372093No Hit
GGTAAGACAATGACAGGAGCTGAAGTAAGTTCAAAGGCTACTGTAAAGAC10.5813953488372093No Hit
GGGGAACAGGGAGAGGGAGAAGCAGGCTCCCGCTGAGCAGGGAGCTCGAT10.5813953488372093No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG10.5813953488372093No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)