FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAA13.571428571428571No Hit
GGACCTCCTGTGCCACCTTAACAAAACAGAACCTTATTCTAATAGCAGAA13.571428571428571No Hit
GTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCC13.571428571428571No Hit
TTGGAAAACTCTGTGCTGATTTGTACCATTATCAATTAATTTGGCCCATT13.571428571428571No Hit
CTTCCTACCTAATCCTGATTCCCCTGCTTTTGCCTGTCTCTTATACACAT13.571428571428571No Hit
ACATACATCATCTCCATTTCACAGATGAGCCTACTAAAGCTAAAAGGGGT13.571428571428571No Hit
CATAAAAACAAGCAATCCAGAAATCTCCATAAACTCACAAATACATCAAT13.571428571428571No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAAC13.571428571428571No Hit
GGAGGGAGAAGCCGGACAGCAGAGAGCGGTTGATGGTGCCCCAGAGGGAG13.571428571428571No Hit
TCCTTATCCTTGTCAGTCTCTCTAAATGTGTCCTTAACTCTCTTTACAGT13.571428571428571No Hit
CAGACACAAAAGGTACATCATTAGTATCACATCATCATACCACTCTCCTC13.571428571428571No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA13.571428571428571No Hit
GTCCTTAAGCATCTGCCTTTGGCTCAGGTCATGGTCCCAGGGCCCTGGGA13.571428571428571No Hit
CAAATCATTTGGCTGGGAATGGAACATTTACCATATGTATGAGTTACTAA13.571428571428571No Hit
TTATATTTCCAGGAACAGGAAGCATATCAGTGTTCCAAGTCTAATTTTTA13.571428571428571No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA13.571428571428571No Hit
AAATGGCAATAATCAAAAAGTACACAACAGGAACGCAAGAGAATAACCAC13.571428571428571No Hit
ACTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACA13.571428571428571No Hit
AGTTTTGGTTTGCATTTTCCTGATAGTAAGTGATGAGCATCTTTTCATGT13.571428571428571No Hit
CACTAAAGGCAGATGCTTAGCTGACTGAGCCACCCAGGCGCCCTAAACAA13.571428571428571No Hit
GTGTAATGGATGGCTGAGTTCTCAAAGGGACTGTTAGCACGGTGGAATAG13.571428571428571No Hit
GGGTAGTGTCATTAAAAGAAGGAATTTGCACACCCTGTACAAGAGCTGTC13.571428571428571No Hit
GCGAAAGCAGGCAAGAAAAAACCACAATAATTGGTGTCCTTTTTTAAGCT13.571428571428571No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG13.571428571428571No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGCTGTCTCTTAT13.571428571428571No Hit
AGCCAAAACATACACAGACAAAAAAGAATATAAATAACAAATAACCTGAC13.571428571428571No Hit
AATCCGAATACATGAAACAAACTTCCAAATGTGTGCATATTGCAGCAAAC13.571428571428571No Hit
AGCAGGGGGAGTAAGAGATGGGGAAGCATACTTCCCATGGAGCAAGGAAC13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)