FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2438
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATAATGGCATACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAA70.2871205906480722No Hit
ACACTATAGATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTT70.2871205906480722No Hit
GTTATCCACCTGAAATATGTGCATTGTGGAATGCCAATTACCTGTCTCTT50.20508613617719443No Hit
CTCCCTGAACAGGGAGCCCAAAGCAGGGCTCGATCCCAGGACCCGGGGTC50.20508613617719443No Hit
ATATATGACAGAGCCTATTGACGAGTACTGCGTGCAGCAACTCAAGGAGT50.20508613617719443No Hit
AATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGTCTTCATAGAACA50.20508613617719443No Hit
GTCTATCTTGGGCTAGAGATAGAATCATGAAAGTGCTTTAGAATTCAGTC40.16406890894175555No Hit
TACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTT40.16406890894175555No Hit
GAATAGAACCGAGTCCAGAAATCAACCCACACAAGGACCGCCAGCGGATT40.16406890894175555No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA40.16406890894175555No Hit
GCCTTCCACCTGGAATGCCCTTCCCTGGCCTTCCCCGCCTGGCGTGGTTG40.16406890894175555No Hit
GTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCCT40.16406890894175555No Hit
CTGAATAGGAAAACCAGAAAAGAGAACATATCAGGCAGAGAGGAAGTGGT40.16406890894175555No Hit
GTTGTTAAGCTTCTGCCTTTGGATCACCTCATGATTCCAGGGTCAAGCCC30.12305168170631665No Hit
CCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTG30.12305168170631665No Hit
GTTTCCCCACTGAGCAAGGAGCCCGATGTGGGACTTGATCCCAGGATCCT30.12305168170631665No Hit
AGCGAAAGCAGGACAGTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCT30.12305168170631665No Hit
TTATAAAAGAAGTCAAAGGCGGTCTTGAATAAGTGGAAGGCTTCTGCCAG30.12305168170631665No Hit
CTATAGTGTACTCAATAAATGTGAACTGTTTTATTGGCAAATGAGTAAAC30.12305168170631665No Hit
GTGCTATAGTCGGAACCACTGTGCAATCCTGCCAGCAAATGGGGGTCAAG30.12305168170631665No Hit
CTACCAAAGAGTGAAAAGACCACCCACTGAATGGGCAAAAATAACTGTAA30.12305168170631665No Hit
CTTTCAAGATCCATTCCACGATTTGTTTCCCAACAAGAGTGGCTGTTTCG30.12305168170631665No Hit
AAACAAGGAAGAACATTCAAGATAGAGGGAAGTATGAACAAAGACCTAAA30.12305168170631665No Hit
GTAGGAGACAGAGTGGCATTTTGTACAATATTAAATTCAGGTTCTCAATA30.12305168170631665No Hit
CTCTTTTTTATGATAGAGGCACTGAAACTAAAGAAAATGGTGGAAGAAAG30.12305168170631665No Hit
ACGTTTATCAGTCTTACAGGCAGAGTTTTAAGTTTGCCCCACCGTCTCCT30.12305168170631665No Hit
GTTTAAAGGACCTCCTGTGCCACCTTAACAAAACAGAACCTTATTCTAAT30.12305168170631665No Hit
ATTCCATATCATGATCTGGAAGGTGATTACACATGTAAATACCTGTCTCT30.12305168170631665No Hit
ACTCTGTGCTGATTTGTACCATTATCAATTAATTTGGCCCATTCACAAAC30.12305168170631665No Hit
AAATATGACATATCAAAACTTATCAGCTGTAGATAAAGCTGTCTAGAGGA30.12305168170631665No Hit
GGCTTATTACAACATGGCCAACGGCGCCATCATCCACCTGGCCCTCAAGG30.12305168170631665No Hit
GGTTTTAGGAGAGTACTTCGTTCTCTTGCCAGAACGACACTTGTCAATAA30.12305168170631665No Hit
GCACAGGAGGTCCTTTAAACCTAATCCTCGCTGGGCAGTCGCCTTCACTT30.12305168170631665No Hit
ATCCCACCCAGGATCCTGGGATCAAGTCCCACATCGGGCTCCTTGCTCCT30.12305168170631665No Hit
CCCTTAGCTTGAGTGTCCTTTGCAGAACCAGAGGTGGGGCTGATCTTACT30.12305168170631665No Hit
GGGTAGGCCAGGTAGACAATGTTGGTGGTTTTCTGGGAGCCCTGGTTTGG30.12305168170631665No Hit
GCCCAGACCGGCCTATCCCACTAAACTGCTGGCTAGAGCTCTGTGAACTT30.12305168170631665No Hit
CAGTACTGCTCTACTTTGCGCGCCTTTGAACATGGGACTTCATCTGACAT30.12305168170631665No Hit
GAATAAGGTTCTGTTTTGTTAAGGTGGCACAGGAGGTCCTTTAAACCTAA30.12305168170631665No Hit
GGGGTACTGGTAGGCAGTCTGCCCCATGTAACCTATCATATTGGTAGCTC30.12305168170631665No Hit
AAACAAGGGTCCAGTGTCCATCAAAGTCCAAGTGCCCAACATGCAGGATA30.12305168170631665No Hit
CCTGGAGGCTGTGCAAACTGTTGTGACATCAGTGGCTGTGGCTGCTGCCC30.12305168170631665No Hit
ATTTTTATTAGACATGAGGTCTTAGCCAAGTCACTTCACCACTTTTTGAC30.12305168170631665No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)