FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_C3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1471
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTGTTCTACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTT50.3399048266485384No Hit
ATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCTGTCTCTTATACA40.27192386131883073No Hit
GCAGATAGGAGACGCAGATTTGGGCTTTTGGGATTGAAATAGTCCCCAAA40.27192386131883073No Hit
TTCCTATACAGATGGCTCTAATTTGGGAAGTACACTGACTTTTTGACTTG40.27192386131883073No Hit
GTTTAAAGGACCTCCTGTGCCACCTTAACAAAACAGAACCTTATTCTAAT30.20394289598912305No Hit
GGATTCCAACTCATTGGCTTATTACAACATGGCCAACGGCGCCATCATCC30.20394289598912305No Hit
TTACAATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAACTTTGGACT30.20394289598912305No Hit
TCCCAGGACCCGGGGTCATGACCTGAGCTGAAGGCAGCCGCTTCACCGAC30.20394289598912305No Hit
GAACTTATATGAAAAGGTAAGAAGCCAGCTAAAAAACAATGCCAAGGAAA30.20394289598912305No Hit
GAGCAGTACTGTGTTCCCATTCGGTACCCCGAAGAACCCCGAAGAACCCC30.20394289598912305No Hit
AAACAAGGTAGTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGT30.20394289598912305No Hit
GTTGAATAGATCGCCAAAATCTGGTAAATCCTTGTTGATTCCAGCTTTAC30.20394289598912305No Hit
GAGTGGGAGAGTAAATAAGTAGAATGAGAAGGAAAACCCAAGAAGGGTCT30.20394289598912305No Hit
ATGCCAAGCATGGAATTACTTTACATACATCATCTCCATTTCACAGATGA30.20394289598912305No Hit
GCATGGAATTACTTTACATACATCATCTCCATTTCACAGATGAGCCTACT30.20394289598912305No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT30.20394289598912305No Hit
GACTTGAATGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGA30.20394289598912305No Hit
ATATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCC20.13596193065941536No Hit
GGGTAGAGTCTGACCGCCCTCGCACACACATCTCTGGTCCCGACTTCTCT20.13596193065941536No Hit
CCCTTGAAGTAGCCGTTCGGGATGGTCTCGATCCTGTCTCTTATACACAT20.13596193065941536No Hit
GGATAAGACTGAATGGAAACTGAACGGACAGGTGCTGGTCTTCACACTCC20.13596193065941536No Hit
GGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACT20.13596193065941536No Hit
CATTTTCCAATTGTGATCGGATGTATATTCTGAAATGGGAGGCTGGTGTT20.13596193065941536No Hit
CGATTGGACCAGGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTT20.13596193065941536No Hit
GGGTTCTGTTGCATCTTCAAAATGAGTCCTAATGAACACACTGAGTACTT20.13596193065941536No Hit
GTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGA20.13596193065941536No Hit
GGAAAAGAGAGTGGCATCTTCAACAAATGAATAATCAGGGGCGCCTGGGG20.13596193065941536No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT20.13596193065941536No Hit
TCTCTAGCCTTAACACATCTCACTATAACGAGATATGCCATACCTGTCTC20.13596193065941536No Hit
GTTAAACATCTGCCTTCAACTCAGGTCATGATCCCTGGGATCAAGTCCTA20.13596193065941536No Hit
GGGTGAGCTGCGGGAGCACTCAGAGCTCATGGAGGGCCAGGACCTCTATT20.13596193065941536No Hit
CCCTCCGGCCTCCTTCCTCATCCGCAGTCTTCTCTTGAGTTAATGGCCAG20.13596193065941536No Hit
GAGCGCCGGCCTCGAAGGAAGGGAAGTAGAGCCCAGAGATGGAGATCAGG20.13596193065941536No Hit
GGATATGTGTTACTCCCCCAAAAATGTTTATCTCAAGACAGAGCAAAATC20.13596193065941536No Hit
TAACATAATGGCATACAAAAGACTGATCAAGAGATTGAAGCCTGTCTCTT20.13596193065941536No Hit
GTATATAGCCCATCCACTAACAGGGCAGAGAGAGGAATTGCCCGCTAATT20.13596193065941536No Hit
CAGCCTACCTTTCCATTGTTCTCTTTTATCTTCCCAACCAAATTTCGCTC20.13596193065941536No Hit
GAGAAGGGGAAAGGGGTCATCAGACAACGGAGAGCATCGGCACATCCAGA20.13596193065941536No Hit
GAGTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGT20.13596193065941536No Hit
TAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTCTCTTAT20.13596193065941536No Hit
CTGGCATCCTCTGAAAGGTGGTGCAAGGGACCTGGGGTTACCGACGTCCC20.13596193065941536No Hit
GCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGCTTTCTCGTT20.13596193065941536No Hit
TTTACTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACATC20.13596193065941536No Hit
GCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCG20.13596193065941536No Hit
GTTGTGTATCTTCCCTTCTATTAAGTCTGTTTTCACATTCGCCGCCTTCT20.13596193065941536No Hit
GTAGAAACAAGGGCTGGAGAATAGAACCGAGTCCAGAAATCAACCCACAC20.13596193065941536No Hit
GGAGCGAAAGCAGGCTTCCCCCTGAGCAAGGAGCCTGAATAGGGGCTCAA20.13596193065941536No Hit
CTTCAACTCCTAGAATTTGATAAACAGTCTGAGAGAAAGAAGTAATACTG20.13596193065941536No Hit
GAATGAGAAGGAAAACCCAAGAAGGGTCTTCTGTGTACCACAAATTAAGG20.13596193065941536No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA20.13596193065941536No Hit
TTGTCGCACAAAGTCTTCCATTTTGGATCAGTACCTGCTGTCTCTTATAC20.13596193065941536No Hit
TAATATTACAAAGGAGGAGGGTCCTCAAGGTTAAGACCCATCCAAGTTCA20.13596193065941536No Hit
GGGGATGGGGGGCCCGTGGGAGGGAGGCCTGAAGGGCAGAAACTCGGGGA20.13596193065941536No Hit
GTCTATATGGCACCAACTTTCTTCCACCATTTTCTTTAGTTTCAGTGCCT20.13596193065941536No Hit
CCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGTATTGCTCTTCGACTAA20.13596193065941536No Hit
GGGAAAGTGGCAGAGATAGAGGAGGAAGCAGGCCCCCCGCCGAGCAGAGA20.13596193065941536No Hit
GGTAAATCCTTGTTGATTCCAGCTTTACCCCATCTATTTCTTCTCTGTTT20.13596193065941536No Hit
CCAGAATCCCGCCTGGCGTCTTCAGCAAGCTGGACAGCCTGCTGCTCCTG20.13596193065941536No Hit
AGGGGTGGGATGTGATGGGTAAAAGGTGGTCTGAGAGGGCTAAAGCCTTA20.13596193065941536No Hit
GGGTCCGAACAGTGCTGGTGATTGCTCACAGGCTGCAGACGGTGCAGAGT20.13596193065941536No Hit
GCAACACCCTAGGCGATCAGCATTATTATTATACCCATTTTACAGGTGAC20.13596193065941536No Hit
GAGGTAAACATTGGTTTATTTCCTGGCTAAATATAGATTTCTTTCTGTCT20.13596193065941536No Hit
ACACCAATGTATTGGGACAAGGCAAAGTGAGGCCCGAGGCCAGCTCACCT20.13596193065941536No Hit
GTCCTAGGATCGAGCCCCGCATCCGGCTCCCCGCTCAGCGGAAGCCTGCT20.13596193065941536No Hit
GCCTCATGGTGCCCTTAGCTTGAGTGTCCTTTGCAGAACCAGAGGTGGGG20.13596193065941536No Hit
TGAATAATCAGGGGCGCCTGGGGGGCTCAGTCGGTGAAGCGGCTGCCTTC20.13596193065941536No Hit
CATCGGAGGACTTGAATGGAATGGTAACACGGTTCGAGTCTCTGAAAATA20.13596193065941536No Hit
GCGGTTTGCTCATGAGTGTCTCCAAGATGCATATCCTGTCTCTTATACAC20.13596193065941536No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG20.13596193065941536No Hit
GACCAGGTCTCTGTCATCAAGGTGAAGATTCACGAAGCCACGGGTATGCC20.13596193065941536No Hit
TCTTAGAGCTATTGATGTGTTTTTTCATCTAATTTGGAAAATTTTAGCAA20.13596193065941536No Hit
CTTAAAGACCTATACACAAATGCATATTTGTGCATAACAGCCAAGAACTA20.13596193065941536No Hit
AAGTTTCTATGTTCCAAGTCTCTTCCTACCTAATCCTGATTCCCCTGCTT20.13596193065941536No Hit
GTACCATTATATTTCCAGGAACAGGAAGCATATCAGTGTTCCACGTCTAA20.13596193065941536No Hit
CTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGG20.13596193065941536No Hit
GAATATGGCGCTGGCACTTACGGGGCTAGTAGCACCACCTCAACTGGGAG20.13596193065941536No Hit
CCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTGGCTAT20.13596193065941536No Hit
TCCCCAAAACTACCAAAGCTCAGGGACTTGATTTGTTAAAAATTCATTTA20.13596193065941536No Hit
CAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGG20.13596193065941536No Hit
AGCGAAAGCAGGGGATTAGGAGTACACTTTCTGTGAGAAGCTCTGAGTAA20.13596193065941536No Hit
GTGAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTGTGAAATGGA20.13596193065941536No Hit
ACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAGGGAGACTACCAGT20.13596193065941536No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACTGTC20.13596193065941536No Hit
GTAGAGAAGGCTATGTATAATAAGGATATGTAATGCAACAACATTTTTAG20.13596193065941536No Hit
GCACAGGGGCGAGCTGGGGATGTCCCAGGGCCGCCCACTCGGTCTCCCTC20.13596193065941536No Hit
ATCATGACCTGAGCCAAAGGCAGACACTTAACCGACTGAGCCACCCAGGT20.13596193065941536No Hit
AAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCA20.13596193065941536No Hit
CGACTGGCCTGCAGCTCATACACCTTCTGGTCAATCAAATCTGAGACGGT20.13596193065941536No Hit
TTATTGTTCTTTCTCCCCAAAGTAGTCTTTCCTGATGTCTGACTGCTCCT20.13596193065941536No Hit
CATTTATTGAGTACACTATAGATGCCAAGCATGGAATTACTTTACATACA20.13596193065941536No Hit
CCCTCAGAGTCAGCAGAGAACAAGGGTCCGCTGGCTGAGTGGGGGCACTG20.13596193065941536No Hit
GTCTTCATAGAACAATTAATCCCAATTATACCTAACCACAGACTGGAATT20.13596193065941536No Hit
CTGTTACATAGCACTGTGACCTAGATTAGTATTAAGTTCCCAGAAGAGTA20.13596193065941536No Hit
TTAGTGTCATTTACCTTCATTCCTTCCCATGGCACTGTAGGTCATGAGCC20.13596193065941536No Hit
GTTTGAAAACATCGGAAGTTGGCCAGTCCTGGGTTTGTTCAAGTTCTGTA20.13596193065941536No Hit
GGGATGGTAAGGAAAGAGAACAAAGGTGAAAAAATCTTTCTTTGTAGTTT20.13596193065941536No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCTCTTTGAG20.13596193065941536No Hit
CAGTAATGCCTTCCTGTTAATGGGATGTCATCTACGCACACTGGGCTCAG20.13596193065941536No Hit
AGCAGGAGGAGTGGGAGAGAGGGAGGCACGCTTCCTGCTAAACAAGGACC20.13596193065941536No Hit
GCTATATACATTTGCAACCGCAAATGCAGACACATTATGTATAGGTTATC20.13596193065941536No Hit
GCTTTAACGCGAGAACCACCGCCCTCTACCGGTGGGATCTGGAGGGACCT20.13596193065941536No Hit
ATTCTTACACTGTTGTCTTTACTGTATATAGCCCATCCACTAACAGGGCA20.13596193065941536No Hit
GGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGA20.13596193065941536No Hit
AAACAAGGGTCCAGTGTCCATCAAAGTCCAAGTGCCCAACATGCAGGATA20.13596193065941536No Hit
CTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATTTCCTCAAAT20.13596193065941536No Hit
AAGTGAAGGCGACTGCCCAGCGAGGATTAGGTTTAAAGGACCTCCTGTGC20.13596193065941536No Hit
GTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG20.13596193065941536No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT20.13596193065941536No Hit
ATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTGAC20.13596193065941536No Hit
GCTCTATCCCAGGACCATGGGATCACAACCTGAGCTGAAGGCAAGCACTT20.13596193065941536No Hit
ACACTATTCTAGGGGCTGGGATTACCTGAAGGTTGAGAGACAAAGTCTCT20.13596193065941536No Hit
GTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGAT20.13596193065941536No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC20.13596193065941536No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC20.13596193065941536No Hit
TTTGGGAGCAGTGATCATAATGGGCACTCCTTGCATTCACGCACATAGAC20.13596193065941536No Hit
GACTTAATAGAAGGGAAGATACACAACAGGTTGCTGGAAACATAGGAAAC20.13596193065941536No Hit
GCAGTATGAGGGCATTTTCATCAAGGATTCCAACTCATTGGCTTATTACA20.13596193065941536No Hit
AAACAATATATTGAGAACACAAGAGTCTGAATGTGCATGTGTAAATGGTT20.13596193065941536No Hit
ATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTCACT20.13596193065941536No Hit
CTGGGTGTCAGACTGAGGGAGGGAGAAGCCGGACAGCAGAGAGCGGTTGA20.13596193065941536No Hit
CTTCGGCTCAGGTCATGATCCCAGGGTCCTGGGATTGAGCCTGTCTCTTA20.13596193065941536No Hit
TTGTAAGTCCAAATGTCCAGGAAACCATCATCAACTTTTTTATCTGTCTC20.13596193065941536No Hit
GGCGATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCT20.13596193065941536No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)