FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B8_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B8_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAGAGACACTGTATTTAAAAGTACGACTAAACTAAGCCGTTATCCTAT12.1739130434782608No Hit
CTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCA12.1739130434782608No Hit
GATAAAAAGAACATCTGTATGCATGAATTTTCCATACTTTTTTCCCAAGG12.1739130434782608No Hit
CTATTATTTAGTGGGAAAAATGAAGTGCAAAATAAACGTATGATCCCACT12.1739130434782608No Hit
CGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCAT12.1739130434782608No Hit
GTCAGTAAGTATGCTAGAGTCCCGGTTTCGTTTCATTGCCATCATCCACT12.1739130434782608No Hit
GGAGAAGCAGGCTCCCTGCTGAGCAGAAAGCCCAACGCAGGACTTGATTG12.1739130434782608No Hit
AGATCACTAGTGGACAGAGAGGCAGGCAGAGAGAGAGGAAGAAGCAGGCT12.1739130434782608No Hit
GTAAAAGGACAAAACAGCAGTCGTGAAGATCGAAACTGGAAAATGACTAA12.1739130434782608No Hit
TGTTCCCGGTGTCCTGTGCCCCACCCCCAGCTGGGAGGATGTGGACCCGG12.1739130434782608No Hit
ATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGGGACGTA12.1739130434782608No Hit
CCATTGCCATCCTCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTT12.1739130434782608No Hit
GAACTGAGAGATCTAATGTCGCAGTCACGCACTAGCGAGATACTCACTAA12.1739130434782608No Hit
GCCTTAAACACACATTTGAAAAAAAGGGCTAGACACCAATGCTCTAATTA12.1739130434782608No Hit
CAACTGAGGGTTGCTGGAAGGGAGAGGGGTGAGGGAATGGGGTAACTGGA12.1739130434782608No Hit
TAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCGGACACTG12.1739130434782608No Hit
AAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGAACAAATA12.1739130434782608No Hit
GCGAAAGCAGGAGGAGGAACAGAAAGAATATCTAATCTGTCTCTTATACA12.1739130434782608No Hit
GTTTACTTTGGAATAACCGCAAGCGATTTGAAGACAATGCAGTGGGTCTG12.1739130434782608No Hit
GGACACGTAAAGCGGCCCAGCGGGTCGGCCTCCGCTGCGGGCCCAGCCAG12.1739130434782608No Hit
GCCTTTGTCTCCATATTTCTCAGGACAGGAGTTTGCCACCCCTCTAGGCC12.1739130434782608No Hit
GTGCAGGAAGGAAGATGAGAAAAGGGAGATGTAGTTTTGCTGTCTCTTAT12.1739130434782608No Hit
ACTCTGTATAAAACTACACACTATTTCTAGAGGCGATAACTAAAGGCCTG12.1739130434782608No Hit
CTAGCGGGGCTGTGTGGCACAGTGGTAGTGGCCGTGGGCTCTGACGGCAC12.1739130434782608No Hit
AATTATATGTTAATTAATTGAATTAAAATTTAAAAAAACTGGGGCAGCTG12.1739130434782608No Hit
TTCTATTCCCGGAACAGTCTCTTCTTCCCCTTGTTTCTACCTGTCTCTTA12.1739130434782608No Hit
AAGTAGCCCTATGTAAAGATAAGGAGAATGTTTATAATAGAGTATCACTT12.1739130434782608No Hit
GTTATATTGTGGTGATGGTTTCAGGGATATATATAGAGATAGATGGATCG12.1739130434782608No Hit
GATGCACAGTCTACCTCACCCTGAATGGTAACAGACTGAACGTTTTTCCT12.1739130434782608No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT12.1739130434782608No Hit
TAGTGGAACACTGCAAGTTATCCCATAGCACGGATACCAAATCTGTGGTT12.1739130434782608No Hit
CTTCTGAAATAACTTTCAATGTTATTGACTCTCATCATCTCATGAAATAA12.1739130434782608No Hit
TCTGGAAGGCGATTACACATGTAAATACTCATCTGCCTGTGTATGGTTAG12.1739130434782608No Hit
CCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAGGGAAA12.1739130434782608No Hit
TAGCAAACCAGTCCTCCTGCTGGGGAAATTATGTAACTCAGAGAACCGGC12.1739130434782608No Hit
GTGGGAGACAGGATGGGTCCCAAGGCTGGAGCTCCTTTCCTGACTCTATT12.1739130434782608No Hit
CTCCAAAACCATGTCAATCTTTCAGGTAGACTGTTTCATTAGGCATATCC12.1739130434782608No Hit
CTTAATTTCTGTCTGATTTTTTTTTTTGCCTTCTCATATCTCAAGAAATG12.1739130434782608No Hit
CCCTTTTTTCATAAACATAAAATCTCACACATCCATGGAGATTTAATGTT12.1739130434782608No Hit
CTAAAAAAAATAACTTCTTTTACATCAAATCCTATTCCAAAATCAAACAA12.1739130434782608No Hit
AGACATAATAACACTCCATCAGTAGTTCTTTTGTCAAATGCATATGAGAA12.1739130434782608No Hit
AGAAAATCCAGTCTCAAAGACACCAGCACACTTGGATTTGGTAATGAATA12.1739130434782608No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG12.1739130434782608No Hit
CCATTATATTTCCAGGAACAGGAAGCATATCAGTGTTCCACGTCTAATTT12.1739130434782608No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACGTG12.1739130434782608No Hit
CCCTTTTACTCTCCAACACCAAGTGCAAGGAAGACAGTGCTCGTTTTCTG12.1739130434782608No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)