FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1307
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG40.306044376434583No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA40.306044376434583No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA40.306044376434583No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA40.306044376434583No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT40.306044376434583No Hit
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA30.22953328232593728No Hit
GTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCCTGTCTCTTATAC30.22953328232593728No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA30.22953328232593728No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA30.22953328232593728No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACCTGTCTCTTATACACATC20.1530221882172915No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA20.1530221882172915No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG20.1530221882172915No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT20.1530221882172915No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA20.1530221882172915No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCTGT20.1530221882172915No Hit
CTAGTTCCTCCCTGCTCCCAGCATATATGTTGAGTCACAGTCTCTCTCTT20.1530221882172915No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCTCTTG20.1530221882172915No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGATATGGCCCAGCATTAAGCA20.1530221882172915No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA20.1530221882172915No Hit
CAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCC20.1530221882172915No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAACTGTCTCTTATACACA20.1530221882172915No Hit
CTGTGGGATCATGACCCCGAGCAGAAGGCAGACGCCTCACCACTGAGCCT20.1530221882172915No Hit
GCAGGCAGGAGGAGAAGCAGGGTCCCCACTGAGCAAGGCTGTCTCTTATA20.1530221882172915No Hit
ATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCAT20.1530221882172915No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC20.1530221882172915No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC20.1530221882172915No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGCCTTCCTGATGTGTA20.1530221882172915No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCCTGTCTCTTATACACA20.1530221882172915No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA20.1530221882172915No Hit
GTGGCAGAGAGAGAAGCAGGCTTCCCACTGAGCCGGGAGCCTGACGTGGG20.1530221882172915No Hit
GTTTCAAACAGCAGCACCACCAGGTCCTTGACAGCTTTGTCGTTCTTGTC20.1530221882172915No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCCTG20.1530221882172915No Hit
CCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGAT20.1530221882172915No Hit
CTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTA20.1530221882172915No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGCTGTCTCT20.1530221882172915No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA20.1530221882172915No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACCTGTCTCTTATA20.1530221882172915No Hit
CCATTGTATGTATACACCATGTTTTGTTTATCCATTCATCATCAGAGCAC20.1530221882172915No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT20.1530221882172915No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC20.1530221882172915No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGATATGGCCCAGCAT20.1530221882172915No Hit
CTCTCCCACTGTCTGTGGGATCTTAGACAAATTATGTGCTTTGCTTCCCC20.1530221882172915No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT20.1530221882172915No Hit
GTGATTGCAGCTCCAGAATATTCTAAGCATGTAAGGTCTGTCTCTTATAC20.1530221882172915No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)