FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B5_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B5_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1386
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC50.36075036075036077No Hit
GAGCAAAAGCAGGAGGAGTGGGAGAGAGGGAGGCACGCTTCCTGCTAAAC30.21645021645021645No Hit
GGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACT30.21645021645021645No Hit
CTCTACATCCCCACTGTTCTGTCTGACCTTCAGGTTCATCTGAGGAGCAT30.21645021645021645No Hit
GCCATCAATTAGTGTCGAATTGTTTAAAAACGACCTTGTTTCTACCTGTC30.21645021645021645No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA30.21645021645021645No Hit
ATCCCAGGACCCTGAGATCATGACCTGAGCCGAAGGCAGAGGTCTAACCC20.1443001443001443No Hit
TCCCAGGACTTTGGAATCATGACCTGAGCTGAAGGCAGACACTTAACAAC20.1443001443001443No Hit
GGAGAAACTGCCCAGTCTGATATTCCTCTACATGGAGAAGAACCAGCTCG20.1443001443001443No Hit
AACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAG20.1443001443001443No Hit
ATGTGCTCTAATGGGTCTCTACAGTGTAGAATATGCTGTCTCTTATACAC20.1443001443001443No Hit
GAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGGG20.1443001443001443No Hit
CTAAAGAAGAGAGTGAGAAGATCCTCTCTCTGGGGTCTGTCTCTTATACA20.1443001443001443No Hit
GTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTATT20.1443001443001443No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA20.1443001443001443No Hit
TTTTTCATGCAAGCAGTAGCCACGTTTTAGAACTGTTTAGAACCTGTCTC20.1443001443001443No Hit
CTCTGGACGTGTCTTCTTGCAGTGACCGCGGCGGATGGGGGCATCAGCCC20.1443001443001443No Hit
GCTCCATCCCGGGACCCTGAGATTGTGACCTGAGGCGAAGGCAGATGCTT20.1443001443001443No Hit
CATGCACACTATGGAATGCCGCTCACTGTAAGCTTTGAACTACTGACTCT20.1443001443001443No Hit
GATCATGACCTGAGGTGAAGGCAGACAATCGACCTGTCTCTTATACACAT20.1443001443001443No Hit
GTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGCTGTCTCTTATAC20.1443001443001443No Hit
GTATGGAAAAGATACAGGAATTAGGGCCAAAGTCATGAAAAATGCGCTGC20.1443001443001443No Hit
GTGTAGCAAGTGAATTAACTAACCCCTTTTAGCTTTAGTAGGCTCATCTG20.1443001443001443No Hit
GCCTTAACAGAGACCATAAAAGAAAAGCTCAAGGCACTTGAAGACAGAAA20.1443001443001443No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTA20.1443001443001443No Hit
GTATGGATAGTTTCTGTCTTCAAGTGCCTTGAGCTTTTCTTTTATGGTCT20.1443001443001443No Hit
CCGGTGAGCTGGGGGCCCAAAGCAGGGCTCCATCCCGGGACCCTGAGATT20.1443001443001443No Hit
CATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAAATACTCAGAGG20.1443001443001443No Hit
GTTTATGCCTTGCCCAGAATGTCATATACTTGGAATCACACAGTGTATAG20.1443001443001443No Hit
TACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAAT20.1443001443001443No Hit
AGAAAGAATAGACTAAACACTGCAGTTAAAGTCAGGGATTTGGGGGCACC20.1443001443001443No Hit
ATCCCAGGACCCTGAGATCATGACCTGAGCTGAAGCTGTCTCTTATACAC20.1443001443001443No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC20.1443001443001443No Hit
GTTCTTGGGGAGCCCCCGGTCTGACAGCCTGTTGTAGTTCAGGCGAATGA20.1443001443001443No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC20.1443001443001443No Hit
TTCTAAATCCTTTTATCTCTGTTCCCTAAATGTGTTGCAGGCATCCAAGA20.1443001443001443No Hit
TACATAACCACTGTACTTCCCTTCCTTCCTAGTCTAAAAGCTGTCTCTTA20.1443001443001443No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA20.1443001443001443No Hit
GTCTTCCTTGCACTTGGTGTTGGAGAGTAAAAGGGTATTTCTTCAGATCC20.1443001443001443No Hit
CAATTAATCCCAATTATACCTAACCACAGACTGGAATTTCCCTGTCTCTT20.1443001443001443No Hit
TTGCAGCACTTCTGGTGTCCATGGTGTATCCTGTTCCTGTTCCATGGCCT20.1443001443001443No Hit
GGATCTTGGTTTTCCCATTTGTATGTTAAGACCACAGGAGTAACCCTGTC20.1443001443001443No Hit
GGTCAATTATATTCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCA20.1443001443001443No Hit
GTATTAGTGTGTGTTGTTTTACTTCTAAACAGCTAACTCAAAGGGGCCAT20.1443001443001443No Hit
CCCCTAAATTCCGTATGGGAGCTTCCTGGTAACTCGTTCTGTTCCCTAAT20.1443001443001443No Hit
TAGCTGCCCTGCCACCCTGCCCATTGCAACTGCTGTCTCTTATACACATC20.1443001443001443No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC20.1443001443001443No Hit
CTATGGAATGCCGCTCACTGTAAGCTTTGAACTACTGACTTGGACATCAT20.1443001443001443No Hit
ACTTAGAGCAGGATCCATAAATGGGCTTCTGGTCTCTTAATCTCCTGTCT20.1443001443001443No Hit
ACCCTGAGATCAAGACCTGAGCTGAAATCAAGGGGGTTGGATGCTTAACT20.1443001443001443No Hit
ATCCCAGGGTCCTGGGATTGAGTCCTGTGTCTGGCTCCCCAGTCAGTGGG20.1443001443001443No Hit
CCCTAAGAACATGCAGGAAAAGAGAGTGGCATCTTCAACAAATGAATAAT20.1443001443001443No Hit
ATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTT20.1443001443001443No Hit
CTATGGAATGCCGCTCACTGTAAGCTTTGAACTACTGACTTGGACATCTG20.1443001443001443No Hit
GTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCCCAGGGAGACT20.1443001443001443No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATC20.1443001443001443No Hit
TTCCTATACAGATGGCTCTAATTTGGGAAGTACACTGACTTTTTGACTTG20.1443001443001443No Hit
GCCTTCTTCCTCAGTGCAGGCCCACTCATCTCCATCAGGTCATCTTTTAA20.1443001443001443No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT20.1443001443001443No Hit
GAGAAGAAACACAGGCAGCTGGCCTCGCTGGTTAACGACTCTCAGTTTGA20.1443001443001443No Hit
GTCCTTGTGTGGGTTGATTTCTGGACTCGGTTCTATTCCTGTCTCTTATA20.1443001443001443No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)