FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B3_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_B3_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1235
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG50.4048582995951417No Hit
GTTAAGCGTCTGCCTTCAGCTCAGGTCATGATTCCAAAGTCCTGTCTCTT30.24291497975708504No Hit
GATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA30.24291497975708504No Hit
GCTGAGTTCTCAAAGGGACTGTTAGCACGGTGGAATAGTAGGGCCTGTCT30.24291497975708504No Hit
GTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGAA30.24291497975708504No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC30.24291497975708504No Hit
GATTTTGCGTTTTGGCTGCTGAGTGCACAGGGTTGGGGCTGTCTCTTATA30.24291497975708504No Hit
CTATTCCACCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACAC20.16194331983805668No Hit
TCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGAT20.16194331983805668No Hit
CTGCTGAGCAGAGAGCCCGATGCAGGGCTCAATCCCAGGACCCTGGGACC20.16194331983805668No Hit
GAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGA20.16194331983805668No Hit
GCCGTGCTGTGCCATTGCCATGTGGCTGCTGCACCACTAGTCCCTCCCAA20.16194331983805668No Hit
GCTTGCGGGAAAGGCAATGAAAGAATATGGGGAAGATCCGAAAATCGAAA20.16194331983805668No Hit
GAGCAAAAGCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTT20.16194331983805668No Hit
GTTCAGGATTCAGAAGACAGGCACAGAGGAGGAAGAGAGTTGCCAATCAC20.16194331983805668No Hit
GGTCACGATTCCAAAGTCCTGGGATCAAGCCCCGAATCAGGGTCCTTGTT20.16194331983805668No Hit
TTCTTAGGGCCCGTGTGGAAAATCCGCTGGCGGTCCTTGTGTGGGTCTGT20.16194331983805668No Hit
GTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCCTGTCTCTTATA20.16194331983805668No Hit
GCGAAAGCAGGTTGGAGATGTTGAAGGAGTTCTTGGGGAGCCCCCGGTCT20.16194331983805668No Hit
AGACAGAGAGGAGGAAGCAGGGTCCCCGCTGAGCGAAGAGCCCGACGTGG20.16194331983805668No Hit
ATCAAAAAGTACACATCAGGAAGACAAGAGAAGAACCCCGCACTCAGAAT20.16194331983805668No Hit
GTGTACAATATAGGCAGCACAAAACGCACAGTAAGGAGTGAGATACCTGT20.16194331983805668No Hit
CTAAAGCACTTTCATGATTCTATCTCTAGCCCAAGATAGACTGTAGATTT20.16194331983805668No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA20.16194331983805668No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGA20.16194331983805668No Hit
GTTGTTAAGTGTCTGCCTTCAGCTCAGGTCATGATTCCAAAGTCCTGGGA20.16194331983805668No Hit
ACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCA20.16194331983805668No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGA20.16194331983805668No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACGGGATCTG20.16194331983805668No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAA20.16194331983805668No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCATGGCTGTC20.16194331983805668No Hit
CAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG20.16194331983805668No Hit
GCGAGAGGGAGAAGCAGGCTTCCTGCTGACAAGGAGCCTGATGCGGGGCT20.16194331983805668No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG20.16194331983805668No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA20.16194331983805668No Hit
CTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGG20.16194331983805668No Hit
CATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGCTGTCTCTTATA20.16194331983805668No Hit
GACCAGCACCCCTCTTCAGGTTACTGTGCTTCTCTCCTCTGTGTTGACCA20.16194331983805668No Hit
GCCTCGGTGGCTCAGTGGGTTAAGCCTCTGTCTTCGGCTCGGGTCATGGT20.16194331983805668No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG20.16194331983805668No Hit
ATGTAGGGGGAATGACCTGGTGGGAGGTGATTAGCCTGTCTCTTATACAC20.16194331983805668No Hit
CGAACAGGGACCCGGTGCAGGCCTCGATCCCAGGAATCTGGGATCACGAC20.16194331983805668No Hit
CATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAA20.16194331983805668No Hit
GTTCTGGCCTCTGTGGATGAGAGAAGTCCGCGCGCTGGGCGCTCCATGGG20.16194331983805668No Hit
GTCCCGGTACTTTGTTAGGGCATTCTGAGCTAACTTACTATAGTCCCTCT20.16194331983805668No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT20.16194331983805668No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)