FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A5_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A5_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1363
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAGACAGATGGCT30.22010271460014674No Hit
CTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTTATTTCCTCAAAT30.22010271460014674No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT30.22010271460014674No Hit
ATACAGTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTA20.1467351430667645No Hit
CAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGAACCGTGTT20.1467351430667645No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA20.1467351430667645No Hit
GATCTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTG20.1467351430667645No Hit
GGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAA20.1467351430667645No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG20.1467351430667645No Hit
CTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAGAACATAGTACTG20.1467351430667645No Hit
CTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGCTGTCTCTTATACA20.1467351430667645No Hit
ACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGG20.1467351430667645No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA20.1467351430667645No Hit
AAAAGGAAGAGGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTG20.1467351430667645No Hit
GTAGGTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTT20.1467351430667645No Hit
GGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGA20.1467351430667645No Hit
CTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGCCTACC20.1467351430667645No Hit
GTTGAGAATAGAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAA20.1467351430667645No Hit
CTATTGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTT20.1467351430667645No Hit
GAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACT20.1467351430667645No Hit
TCTCAATAATGGTCAACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAG20.1467351430667645No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)