FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2020
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT90.4455445544554455No Hit
GCTTAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGC80.39603960396039606No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATGCATTGTTG80.39603960396039606No Hit
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA60.297029702970297No Hit
CATGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACT50.24752475247524752No Hit
GGATAGGACAGGGTTGGTTATTGACTGAAACTGGGGATGAGGTAATGCTC50.24752475247524752No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG50.24752475247524752No Hit
GTTTCAGTCAATAACCAACCCTGTCCTATCCTTGGAAAACTCTGTGCTGA50.24752475247524752No Hit
GTCCTATCCTTGGAAAACTCTGTGCTGATTTGTACCATTATCAATTAATT50.24752475247524752No Hit
AATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGACTGAA50.24752475247524752No Hit
ATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTGTG50.24752475247524752No Hit
ATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATC40.19801980198019803No Hit
GAGTTATGTTTGTGAATGGGCCAAATTAATTGATAATGGTACAAATCAGC40.19801980198019803No Hit
GTGTATGGTTAGGATTTGCATCTTTCACTTGCTGAATGTAAGAAGCACCA40.19801980198019803No Hit
CATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGATCAGC40.19801980198019803No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC40.19801980198019803No Hit
GTGGTTAGGTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAA30.1485148514851485No Hit
GTATTTACATGTGTAATCACCTTCCAGATCATGATATAGAATACTTAAGT30.1485148514851485No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG30.1485148514851485No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA30.1485148514851485No Hit
GTTGTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAG30.1485148514851485No Hit
ACCATACACAGGCAGATGAGTATTTACATGTGTAATCACCTTCCAGATCA30.1485148514851485No Hit
ACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCA30.1485148514851485No Hit
GAGCAAAAGCAGGGGAAGTGGGAGAGGGAGAAGCAGGCTTCTCACGAACA30.1485148514851485No Hit
TAATGATCCTCTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAA30.1485148514851485No Hit
GTACAAATCAGCACAGAGTTTTCCAAGGATAGGACAGGGTTGGTTATTGA30.1485148514851485No Hit
ATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAATAA30.1485148514851485No Hit
CTATATCATGATCTGGAAGGTGATTACACATGTAAATACTCATCTGCCTG30.1485148514851485No Hit
ACTCTGTGCTGATTTGTACCATTATCAATTAATTTGGCCCATTCACAAAC30.1485148514851485No Hit
GAATACTTAAGTCAACAAAGAGCATTACCTCATCCCCAGTTTCAGTCAAT30.1485148514851485No Hit
ACAAAAGACTGATCAAGAGATTGAAGCAAGAAGGGGAAAAGAAACCTATA30.1485148514851485No Hit
CAATTAATCCCAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAA30.1485148514851485No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)