FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P3_A3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1136
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGG40.35211267605633806No Hit
ACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGG30.2640845070422535No Hit
CTCCCATTCGCTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCATCTTTC30.2640845070422535No Hit
GCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCG30.2640845070422535No Hit
GCATTAAGATGTATGAGGTGTATTCCTTCCCCATCTTGGGAATTCTAGTT30.2640845070422535No Hit
GGTCCAATCGCACGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGC30.2640845070422535No Hit
GGGAGAAGCAGGCTCCCTGCTGACCAGAGACTGTCTCTTATACACATCTC30.2640845070422535No Hit
GTCTAAAAGTATTGCTCTTCGACTAACTAGAATTCCCAAGATGGGGAAGG30.2640845070422535No Hit
CTCTGGCCTTTTCTCATATGCATTTGACAAAAGAACTACTGATGGAGTGT20.17605633802816903No Hit
GGTCATGATCCTGGGGTCCTGGGATCAAGCCCTATGTCAGGCTCCCTGCT20.17605633802816903No Hit
CCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTG20.17605633802816903No Hit
GGTATGGGCTGCAGCATGAAGGGTACTGAGTAAGCCAGGAAGCAGTCCCT20.17605633802816903No Hit
CTGTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCCTC20.17605633802816903No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT20.17605633802816903No Hit
GCTCATACCTTTAACCCCTAGGCTAAAGGGAAACCTTGACGATTACCTAG20.17605633802816903No Hit
GGCCAGGGAAGGGCATTCCAGGTGGAAGGCTGGGCAGAAGCAGAGGCAGG20.17605633802816903No Hit
GAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGG20.17605633802816903No Hit
GTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGC20.17605633802816903No Hit
GTGTAATTATGCGGGTGAAACCCTTTGTTAAAATTTTGGAAGTTTGGTTG20.17605633802816903No Hit
ATCGAGGCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCCTGTC20.17605633802816903No Hit
CCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGCT20.17605633802816903No Hit
CAATAATGGTCAACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACA20.17605633802816903No Hit
CTACTGATGGAGTGTTATTATGTCTTAGGTGGAGGAAATGGTCTACGGAT20.17605633802816903No Hit
ACCTGAGCCAAAGGCAAATGCTTAATGATCCTCTATTGGTGCTTCTTACA20.17605633802816903No Hit
ATGAAGGACGGACATCCGACATGCGAACAGAAGTTATAAGAATGATGGAA20.17605633802816903No Hit
CCATGGGGCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCA20.17605633802816903No Hit
TTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTATGAACCA20.17605633802816903No Hit
GGACTGCAGCGTAGACGCTTTGTCCAAAATGCCCTAAATGGGAATGGGGA20.17605633802816903No Hit
GACCAGCACTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACC20.17605633802816903No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG20.17605633802816903No Hit
AAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTA20.17605633802816903No Hit
CAATAATTGGTGTCCTTTGTTAAGCGCTATTATGTGTCCTAGAAACCTAT20.17605633802816903No Hit
AGAAAGAAGAGTTCTCTGAGATCATGAAGATCTGTTCCACCATTGAAGAA20.17605633802816903No Hit
GAGGGAGACTGAGCATGAGCAGGGGAGGGGCAGAGAGAGAGGGAACGAGA20.17605633802816903No Hit
TCCCTGGCCTTCCCCGCCTGGCGTGGTTGAACCAACCTCCCTTCCTTCCC20.17605633802816903No Hit
ATGTATGAGTTACTAATTTCCTGGACATTATCAGCCATTAGCTGGTTTCC20.17605633802816903No Hit
GAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCCTGTCTCTTAT20.17605633802816903No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTT20.17605633802816903No Hit
TTTCAACACTGATATCAAATGGTTTTCTTGCCTTCTCTTATCCAAGTTAT20.17605633802816903No Hit
ACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCAT20.17605633802816903No Hit
GAGCACAGGATGAGATTTGAACTTGGGCAGTCTGCTCCAGTCCTGTCTCT20.17605633802816903No Hit
GTATACATACAATGGCATATTACTTGGTCTTCAGATGGATGGAAATCCTG20.17605633802816903No Hit
CTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAAT20.17605633802816903No Hit
CCTTAATTTGTGGTACACAGAAGACCCTTCTTGGGTTTTCCTTCTCATTC20.17605633802816903No Hit
GTCTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATGTGTCCATGGCT20.17605633802816903No Hit
CTTTTTGACTGTTTACTCATTTGCCAATAAAACAGTTCACATTTATTGAG20.17605633802816903No Hit
ACTCTAAGTACCTTATGTAAGTAGTGTCATATAGTACTTGTCGTTTGACA20.17605633802816903No Hit
GGTAAGTCGAGGCCAGTTTTGAACTTGGGCAGGGAAGGGGCATCTCGATC20.17605633802816903No Hit
GTATTGCTCTTCGACTAACTAGAATTCCCAAGATGGGGAAGGAATACACC20.17605633802816903No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTCTGTCTCTTAT20.17605633802816903No Hit
GTTCTTTCCTGCAAAGACACTTTCCAGTCTCTGCGCGCTGTCTCTTATAC20.17605633802816903No Hit
CACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC20.17605633802816903No Hit
CATCTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATG20.17605633802816903No Hit
GTTAATTCACTTGCTACACATTCCACAGCAGGAGTTCAGATATGCTCATA20.17605633802816903No Hit
AGATTGTACCCATGAAAAAGGAGCAGTCAGACATCAGGAAAGACTACTTT20.17605633802816903No Hit
ATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCAT20.17605633802816903No Hit
GTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAG20.17605633802816903No Hit
AGACTTACCTCAGCATTTGCTGGGACACAGGAAACCAGCTAATGGCTGAT20.17605633802816903No Hit
CCGTGCTAACAGTCCCTTTGAGAACTCAGCCATCCATTACACAAATCATT20.17605633802816903No Hit
ATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGCTG20.17605633802816903No Hit
CACTTAGGGACAACCTGGAACCTGGAACCTTCGATCTTGGGGGGCTATAT20.17605633802816903No Hit
ATCTTTTATTGCTTATTTGGTCACCACTTCCTCTCTGCCTGATATGTTCT20.17605633802816903No Hit
GTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTC20.17605633802816903No Hit
ACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCC20.17605633802816903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)