FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P2_H4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P2_H4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA24.651162790697675No Hit
AGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCC12.3255813953488373No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATAAGGACTGTCTCT12.3255813953488373No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA12.3255813953488373No Hit
TTATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCCTGT12.3255813953488373No Hit
ACAGGAAACGGCAAAAACGGCAGTGGCTGAGACCTGACAGCAAGTTTCTC12.3255813953488373No Hit
GAATAGATCAGAGGGCCCCAAAATACACTTATGCATGTATGGTCAAATTA12.3255813953488373No Hit
GTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCT12.3255813953488373No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATT12.3255813953488373No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA12.3255813953488373No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA12.3255813953488373No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC12.3255813953488373No Hit
CAATATGGAAATAATCAAAAAGTACACAACAGTAAGGAAAGAGAAGAACA12.3255813953488373No Hit
AGTTCATCCATGCTGTAGCCCGTGTCAGGATTTCCATCCATCTGAAGACC12.3255813953488373No Hit
GCATTGAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.3255813953488373No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA12.3255813953488373No Hit
CTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTA12.3255813953488373No Hit
AGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGG12.3255813953488373No Hit
ATTCTCTCAATATTGAATATAATTGACCTGCTTTTGCTCGTGTATCTTAT12.3255813953488373No Hit
CTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCAT12.3255813953488373No Hit
ACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTT12.3255813953488373No Hit
GGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTAT12.3255813953488373No Hit
GAGATGACTCCCCAGTGATCAACCCAAAAGCTCCCCAGATCAGGTTCTCC12.3255813953488373No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA12.3255813953488373No Hit
AGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTT12.3255813953488373No Hit
GAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCA12.3255813953488373No Hit
GTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGG12.3255813953488373No Hit
AGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAA12.3255813953488373No Hit
GGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAG12.3255813953488373No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.3255813953488373No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.3255813953488373No Hit
GGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACT12.3255813953488373No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTA12.3255813953488373No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.3255813953488373No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC12.3255813953488373No Hit
ACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGTCTCT12.3255813953488373No Hit
CATCTGAATACAGATAACATCCTGAAACCAGTTACATTTCCATGACACAA12.3255813953488373No Hit
ATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTG12.3255813953488373No Hit
ATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGA12.3255813953488373No Hit
CTTTTACGACTCACTATAGGGAGTAGAAACAAGGTCTTTTTTAAACTATT12.3255813953488373No Hit
GTATGCTAGAGTCCCGTTTTCGTTTAATTACCAACACTACTTACCCTTGC12.3255813953488373No Hit
CCTGAGATCATGACCTGAGCCGAAGGCAGAGGCTTTAACCCTGTCTCTTA12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)