FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA22.631578947368421No Hit
GCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAC22.631578947368421No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCCTGTCTCTTATACA11.3157894736842104No Hit
ACAATGAACACATCAAACTACAAAAATTAGATAACACTAATTTACCTGTC11.3157894736842104No Hit
TGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGCCAGACA11.3157894736842104No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC11.3157894736842104No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT11.3157894736842104No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCGGAATGAAGTGGATCTGG11.3157894736842104No Hit
TTACAAAGCTGCCTGACTATTGGAATCTTTCGAGGAGCTTTTTAAAATCC11.3157894736842104No Hit
CCTCAACGAACGGCATCAACATCTAATCAATTGCAAAACACCTGTCAAGA11.3157894736842104No Hit
GGTGATACCATCACTCGGTATGATCCAGCATCGTATGTATTGCTCCAGAG11.3157894736842104No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACCT11.3157894736842104No Hit
GGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCAT11.3157894736842104No Hit
GGCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAG11.3157894736842104No Hit
CAGGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGACT11.3157894736842104No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCCTGTCTC11.3157894736842104No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCTGTCACTTATAC11.3157894736842104No Hit
CTATAAAAAAATTCCAATATAAACAAAACTACAAATAATTAATATCAATC11.3157894736842104No Hit
GTCTAATTCCTTATCAACAAGCTTTAAGTCAGTGCCATTGCCATTAAGTT11.3157894736842104No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA11.3157894736842104No Hit
CTGTGGACCATATGACCAGAATCAAAAACTACACATCAGGAACGCAAGAG11.3157894736842104No Hit
TCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGCAGACT11.3157894736842104No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGGCCAAAATGTGAAGTC11.3157894736842104No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCTGTCT11.3157894736842104No Hit
CTAGAGTCCCGTTTTAGTTTCATTACCAACACTAAGTCCCCATGCACAAA11.3157894736842104No Hit
CCATCATCCACTACATTCTGAGTGCGGGGTTCTTCTCTTGCCTGCCTTAT11.3157894736842104No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA11.3157894736842104No Hit
CTCCCTTTGCAAGATTTGCTCAGTTCATTGATGCTTAATGCTGGGCCATA11.3157894736842104No Hit
AAGCATAAAACTGTTCCAGTTCAAAGTATTTATGCATTATATACATTATA11.3157894736842104No Hit
TGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAAT11.3157894736842104No Hit
GTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAAT11.3157894736842104No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT11.3157894736842104No Hit
CCTATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGA11.3157894736842104No Hit
ATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTG11.3157894736842104No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACC11.3157894736842104No Hit
GTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGATGGGA11.3157894736842104No Hit
GACCATATTGCCATAATCAAAAAGTACAAATCATGAAGGCAAGATATATT11.3157894736842104No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTC11.3157894736842104No Hit
GTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTT11.3157894736842104No Hit
AGAGAATGCCTCATTTCCAAAATGTATGTGACTGCATGGTCCTTCTATAT11.3157894736842104No Hit
GACTAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGTATATA11.3157894736842104No Hit
AAAAAACTCATTAAATAAATTCATAATTATGGCAAAAATCTCATCAATTA11.3157894736842104No Hit
GTTAACGACTCTCAGTTTGAGGCTTAAGATGGTAAAGAGAAAGAAGAAAA11.3157894736842104No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC11.3157894736842104No Hit
GTCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG11.3157894736842104No Hit
GCACTTTTACATTCAAATATTAAAAAAAGTACATTATTATATACAAACAT11.3157894736842104No Hit
GAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGG11.3157894736842104No Hit
ATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATTG11.3157894736842104No Hit
CAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAG11.3157894736842104No Hit
CTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATC11.3157894736842104No Hit
CCTTGGGTCTGCACCTGAAGTCCACCGGTAGTCTGCCACCGCACCTACAC11.3157894736842104No Hit
GAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAA11.3157894736842104No Hit
TCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGG11.3157894736842104No Hit
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT11.3157894736842104No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTCTGTCTCTTATA11.3157894736842104No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT11.3157894736842104No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA11.3157894736842104No Hit
CCTGAGAGGATTTATCATTTTGGGCAAAGAAGACAAGAGATATGGCCAAT11.3157894736842104No Hit
GGGCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT11.3157894736842104No Hit
GTACACATCAGGAAGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAAC11.3157894736842104No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAGTGAGA11.3157894736842104No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG11.3157894736842104No Hit
ATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGAT11.3157894736842104No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA11.3157894736842104No Hit
ATCTTGCCAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTA11.3157894736842104No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC11.3157894736842104No Hit
TCTGGGGTGGAGTCTGCTGTCCTGAGAGGAATTCTCCTTTTGGGCCATGA11.3157894736842104No Hit
GCATTAGGCATCAATGAACTGAGCAATCTTGCAAAAGGAGGGAACGCTAA11.3157894736842104No Hit
GCTTGGACTGGAGGTCAGCAAGCCACGCACGGGCCTTCACACTGCGGTCC11.3157894736842104No Hit
GTAATTGGGTATCTCATTGCCATCATCCACATCATTCTGAGTGCGGGGTT11.3157894736842104No Hit
CAAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA11.3157894736842104No Hit
CAAAAAGAATTCGGATGGCCATCAATTAGTTGTAGAAAATTTTAAAAACG11.3157894736842104No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG11.3157894736842104No Hit
ATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGA11.3157894736842104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)