FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGA24.25531914893617No Hit
TGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAA24.25531914893617No Hit
GGTGTGTCTTCACCCTTCCCGTGGATGATAGGGAGACCCGGCCGCAGGCA12.127659574468085No Hit
TACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCG12.127659574468085No Hit
GGATTGACATCCATTCAAATGGTTTGCCTGCTTTTGCTCCTGTCTCTTAT12.127659574468085No Hit
GATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACA12.127659574468085No Hit
GAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCTGTC12.127659574468085No Hit
GTTTCTTACCGTGCGTCCCTTCTCTTTTCCCACAGTTGGATTATAAATTC12.127659574468085No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGCTGTCTCTT12.127659574468085No Hit
GAACAGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAAATGGTCT12.127659574468085No Hit
CTGTTTACTGTGTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGG12.127659574468085No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGCTGTCTCTTATACACATCTC12.127659574468085No Hit
CCCCAGGATCATGACCACAGCCGAAGGAAGAGCTCTAACCTGTCTCTTAT12.127659574468085No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG12.127659574468085No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGATATGGCCCAGCATTAAGCA12.127659574468085No Hit
AATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCA12.127659574468085No Hit
GTTTAATGTTTCCATGGTGTATCCTGTTCATGTTCAATGTCTGTATGGAG12.127659574468085No Hit
ATGTAGGTATGGTCCATGGTCTTCTTTTCCCTCTTTTTGTTAACTGCTGG12.127659574468085No Hit
AATGTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA12.127659574468085No Hit
AGACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATG12.127659574468085No Hit
ACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGA12.127659574468085No Hit
GTTACTCAGAGCTTCTCACAGAAAGTGTACTCCTAATCCCCTGCTTTCTG12.127659574468085No Hit
CCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCCTGTCTC12.127659574468085No Hit
CAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCC12.127659574468085No Hit
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA12.127659574468085No Hit
CTTCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTG12.127659574468085No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC12.127659574468085No Hit
GCACTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTG12.127659574468085No Hit
GTATGCTAGAGTCCCGTTCTCGTTTCATTACCAACACTACGTCCCCTTGC12.127659574468085No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG12.127659574468085No Hit
TTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCGTCATCCACTTC12.127659574468085No Hit
AAGATGCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATT12.127659574468085No Hit
ATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTC12.127659574468085No Hit
GTTCTGTTTACTGTGTCCATGGTGTATCCTGTTCCTGTTCCTGTCTCTTA12.127659574468085No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC12.127659574468085No Hit
GATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTT12.127659574468085No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACCTGTC12.127659574468085No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC12.127659574468085No Hit
CAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATA12.127659574468085No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT12.127659574468085No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTC12.127659574468085No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGGTGCATTACCAA12.127659574468085No Hit
ATGCTAGAGTCCCGTTTTAGTTTAAATAACAACACAAAGTCCCCTTGACC12.127659574468085No Hit
ATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATA12.127659574468085No Hit
GGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAA12.127659574468085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)