FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_H1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC23.7037037037037033No Hit
TCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTGTCTCTTATACACATC11.8518518518518516No Hit
GGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATT11.8518518518518516No Hit
ATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC11.8518518518518516No Hit
AGATCATTTAAAATATAAAAACAAATAAACCACACAACATAAAAATAATA11.8518518518518516No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAACTGTCTCT11.8518518518518516No Hit
AATTTTGACAATATGTCAATAATAAAAAATTACACATAATGAATGAAAGA11.8518518518518516No Hit
AGTGACAAAAGGTCATGCTGAATGTGGTGGTTGGCAAGGAGATCAATGAA11.8518518518518516No Hit
CTAAATAATAGGTCCTGGGTAGGGATAAATCTAATGCACCTTTTAAAATA11.8518518518518516No Hit
GGAACAGGATACACCATGGACACAGTAAACAGAACACACCAATACTCAGA11.8518518518518516No Hit
TCCTATTCCACCATGTTACGGCCAGAGGTGATACCGTCACTCGGTCTGAT11.8518518518518516No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAAC11.8518518518518516No Hit
GTAAACAGAACACACCAATAATCAGAAAAGGGAAAGTGTACGACAAACAC11.8518518518518516No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTGTC11.8518518518518516No Hit
CCCAATAAGTAAGCCATCAAGTAGATCCAGACTCAGTTCTTGTGTAGTCT11.8518518518518516No Hit
TAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATCTGTCTCTTATAC11.8518518518518516No Hit
AGACAAGAGATATGGCCAAGCATTAAGCATCAATGACCTGAGCAATCTTG11.8518518518518516No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGT11.8518518518518516No Hit
CAACTGTGATGGCACCTGTGGCAGCTGTTGACGGGTGCAACTCAGATTCC11.8518518518518516No Hit
GACAAAATCAAAAAGTAAAAATCACGAAGCCAAGACAAGAAACCACCACT11.8518518518518516No Hit
GAAGACAAGAGATATGGCCCAGCATTAAGCATCGATGAACTGAGCAATCT11.8518518518518516No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG11.8518518518518516No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTCAGTCCAGCA11.8518518518518516No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAA11.8518518518518516No Hit
TGTAAATACTCATCTGCCTGTGTATGGTTAGGATTTGCATCTTTCACTTG11.8518518518518516No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA11.8518518518518516No Hit
GTTTTGTAGTTTGGCCTTTGACGATATGTCTAACACTGTCTTTGAGGTCA11.8518518518518516No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGAAGTCCCGCACTCGCGAGATA11.8518518518518516No Hit
GTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG11.8518518518518516No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT11.8518518518518516No Hit
AGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAA11.8518518518518516No Hit
GTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACCTGTCTCTTA11.8518518518518516No Hit
GTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGC11.8518518518518516No Hit
GCATGAAGGGTACTGAGTAAGCCAGGAAGCAGTCCCTCATTATGCAAAAA11.8518518518518516No Hit
GTCTAGTTAATAAAGCCCTACTATTCCACCGTGCTAACAGTCCCTTTGAG11.8518518518518516No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT11.8518518518518516No Hit
CAATACGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA11.8518518518518516No Hit
GCTCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT11.8518518518518516No Hit
CAGTGGGTTAAGCATCTGCCTTTGACTCAGGTCTGGATCTGTCTCTTATA11.8518518518518516No Hit
CCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGT11.8518518518518516No Hit
CAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTAGTCTGTCT11.8518518518518516No Hit
AAGGCAAGAGAAGAACCCCGCACTCAGAAGGAAGTGGCTGATGGCATGGA11.8518518518518516No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT11.8518518518518516No Hit
GGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGC11.8518518518518516No Hit
CCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGC11.8518518518518516No Hit
AATTACAACAAGGCAACCAAACGACTTACAGTTCGTGGAAAGGATGCAGG11.8518518518518516No Hit
ATACCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCATTAATCATC11.8518518518518516No Hit
CCTACTATGTGCAAGGTATAGTGTTAAGAACTAGGGTTATAGCCTGTCTC11.8518518518518516No Hit
GAGTTAGAGAGGGAGGGTCATTCAGCCATGCAGGAGTTGATTTTTGAGGA11.8518518518518516No Hit
ACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATT11.8518518518518516No Hit
GGGGGGTGCAGCAGGCAGAGGGAAAGGGAGAAGCAGGCTCCCCGCTGAGC11.8518518518518516No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA11.8518518518518516No Hit
GTCAGTAAGTATGATAGAGTCACGTTTTAGTTTCATTACCAAAAATAATT11.8518518518518516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)