FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA24.0No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATTGCCATATGGTCCACA12.0No Hit
ATGATGCAAAATTCTAATCCAAATCAATTAAAAACTATAAAATACACATA12.0No Hit
AATCTTGAAATCATGATCATTAATTTAACATAAAAAACATAATCTACAAA12.0No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACCT12.0No Hit
CAATTCTACAAAAAATACAAACACAACCTACAAATTAACAAATATCACAG12.0No Hit
AATTCACCTTTACAACTATTCCAAAAAAGATTTATAAAAATTACTTAAAT12.0No Hit
ACTTTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAATGCAAGA12.0No Hit
CCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGT12.0No Hit
GCTAAATGCTGGGCAATATCACTATTCATCTTTCCCCAAAATGAGAAATC12.0No Hit
TATCAAATCTCCACTAAACAATTACAAAAAGGCAACCAAAAAAAACAATT12.0No Hit
AAAATACATAAACAAGCCCAAATAGCTCAATAACTCTATATACTTAATAA12.0No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.0No Hit
ATATCGCAAAAGAAAAGAACGCTAAACTCATAAAAGGGAAACCGTACTTA12.0No Hit
AGCTAAAATACTAATTGCCCAACAACAAGTACAGTTCATAAACAAAAGAA12.0No Hit
GACTACAAGATGGGCAAATAATTCTCACTTACTCTGCAGACCATGGGACT12.0No Hit
ACACAGGACCATATGAACAAAAACAAAAATTAAACAAAACAAATTAAAGA12.0No Hit
AATTCAATCAGTAATTATAATACATTCAAGATTTCTATTAATTACAAACA12.0No Hit
CTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGCTGT12.0No Hit
CAAATATACAGAATAGTTACTAATCATCAACTCAGTTATTCAAACATAAA12.0No Hit
CAAGAGAATAATGGAAATGATTCCAGAGAGGAATGAACAAGGACAAACCC12.0No Hit
TCTCATTGCCATCATCCACTTCATTCTTACTGCGGTGTGCTTCTCTTGCC12.0No Hit
ACTGTGTACCATATGGCCATAATCAAAAAGTAAACAACAGGAAGGCAAGA12.0No Hit
GTCTTTGCATAGCTTTCGCTTTATGCGTGTGGGTTTGTGTTCAAATTTCT12.0No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCA12.0No Hit
ATATCCCACATCATTAAGCATCAATCAACTGACAAATCAACAAAAACTAC12.0No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.0No Hit
ATTGAATACTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTAT12.0No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT12.0No Hit
CTAAATGACATAAAAAAAAACAGCAAAAAAAACAATAATCAAAAATATTC12.0No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTGTCATTACCAACACGACGTCC12.0No Hit
TTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.0No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA12.0No Hit
GGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATAAGACCGAGTGAT12.0No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.0No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGTCAATGAGATACCC12.0No Hit
TTGCTTAATGCATCTTGGTTCAACTCCTTCCTCACACATGCACTGAAGTA12.0No Hit
GATCACCAAATGACTTAACATGCTGGAAAATGAATAAACAAACAAAAAGT12.0No Hit
CTATTCGACAACTAATTGATGTCCATCAGAATTCTTTTCTTCGCTGTCTC12.0No Hit
GTCAATGCACCTGCATCCTTTCAAAGAACTGTAAGTCGTTTGGTTTCATT12.0No Hit
GGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACT12.0No Hit
GACAAGAGAATAATTGACATGATACCAGAGATGAATGAACAAGGACAAAC12.0No Hit
CTCGAGAGATACTCACTAAGACCACAGTGGACCATATGGCCATAATCAAA12.0No Hit
ATTCAATATGGAGAGAATAAAAGAACTGATAGAACTAATGTCGCACTCAA12.0No Hit
GAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGTATATA12.0No Hit
CTACTAACACTACAAAAAATACAACAAAAAACATCTCTCATATACACATA12.0No Hit
ATTCAATACAGGAGAATTCCAAAAAAATACATAATCGAAATAAAATAAAA12.0No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC12.0No Hit
GTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGA12.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)