FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATT13.125No Hit
TCTAGAAACTGATTTTCTTCAAGGTTTCCTGTATGGTAGGCACCTGAAAT13.125No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC13.125No Hit
GAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAA13.125No Hit
CAAAAATAGAGGAAAAAAAAAAAAATGAATTTAGCTCTCTTCCATAACCC13.125No Hit
CATCTGTACCTACATCGCGCTACCTTTCTGACATGACCCTCGAGGAAATG13.125No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC13.125No Hit
CTTTTGGTCGCTGTCTGGCTTTCAGTAAGTATGCAAGAGTCCCGTTTACG13.125No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCT13.125No Hit
GGAATCATGTCCAGTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGC13.125No Hit
GCAGACAGAGAGGAGGAATAAGTCTCACCGCTGAGCTAAGAGCCCGACTG13.125No Hit
CAAAAAAAATAACAAAAAACACCACACAAAACAAAAATGTACCTGATTCC13.125No Hit
GACTGAATATACAGATGAAGGCACATCTGGGGTGGAGTATTCTGTCCTGA13.125No Hit
GGAAAGGGGTCATCAGACAACGGAGAGCATCGGCACATCCAGAGGCCTGC13.125No Hit
AACTAAATGAAAGCCAGACAGCGACAAAAAGTATGACGATGTACATCAAT13.125No Hit
CCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTT13.125No Hit
GTATATATGAAACTAATATCACACTGTATGTTAATTACACTGGAATTAAA13.125No Hit
ATAAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGTCTCTTAT13.125No Hit
ACAATAAACTCAACATAGCTATAAGTAATAATATCTATACAAAGATCCCC13.125No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCATCTGGAGCAAAACAAAC13.125No Hit
TCCCAAAGTGCAGGGAGCCTGATAGCGGGCTTGACCCTGGAATCATGAGG13.125No Hit
GTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGCTGTCTCTTATAC13.125No Hit
CAACAAACTAGAAAAATCAGAGAACACTAATTTCATAAAAACCCAAGACG13.125No Hit
CAAAAGAATAATCTAAATCAATCAACAAATGAATGACACAAACTTAAACA13.125No Hit
ATAAAAAAACCTCCACAGTGGAATAAGTTAGTATAAACAAAGTCCCTGAC13.125No Hit
CCCAATTACAGAAGACAAGAGAATAATGGACATGATTAAATGTCTCTTAT13.125No Hit
ATTAGAACCAAATTGAAATAAAAAAAAATTAAAAATCACGAAGTCAAGAT13.125No Hit
AATCATGACTTGAGCTGAAGGCAGATGCTTACCTGAGTCACCCAGGTGCC13.125No Hit
AAACGGGACTCTAGCATACTTACTGACAGCCAGACCTGTCTCTTATACAC13.125No Hit
GCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTG13.125No Hit
AAAAAATCAGCTCAATTATAATCAATAATTACAGAATAAAAGAATTAGTA13.125No Hit
GAATAAAAGAACTGAGAGATCTAATTTCGCAGACACACACTCGCGAGATA13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)