FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAAATAACATACACAATAACAACACAAAAGAGAAAAATCCACATTAATA11.8867924528301887No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC11.8867924528301887No Hit
GAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAA11.8867924528301887No Hit
ACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATG11.8867924528301887No Hit
CCCCAGAAGTCACATCAACTGAAACTAAATAAAATTAACCTCAAATAACT11.8867924528301887No Hit
AGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCA11.8867924528301887No Hit
TACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAA11.8867924528301887No Hit
ACAAGGAGCAAGGGAAACTATGGATTTCATTTGTAAAAGTACAAAACAGC11.8867924528301887No Hit
CAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTG11.8867924528301887No Hit
ATCATACATACACACATACATACAAATACCAAAACAAATACCAATTCCAA11.8867924528301887No Hit
GAACTGTACTTGTTGTTGGGCAATTCCTATTCAACCATGTTACGGCCAGA11.8867924528301887No Hit
ATTCAAAAGAATTAAATTAACACAAGGAAACCAAAAGACAAAAATAACTA11.8867924528301887No Hit
ATGCTGGATCAGACCGAGTGATGGTCTCACCTCTGGCCTGTCTCTTATAC11.8867924528301887No Hit
CTCTGGAAGCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCC11.8867924528301887No Hit
GGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGCTGTCTCT11.8867924528301887No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAA11.8867924528301887No Hit
GAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTG11.8867924528301887No Hit
CATTCTGAGTGCGGGGTTCTTATATTGACTTACTGATCTGTACTTAAAGA11.8867924528301887No Hit
ATTACGACAAGTCAAACAAACTAATTAAAGTTCTTTGAAAGTATGAATGT11.8867924528301887No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA11.8867924528301887No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTCTTATACACATCT11.8867924528301887No Hit
GAATAAAAGAACTGAGAGATCTAATGTCTCAGTCCCGCACTCGCGAGATA11.8867924528301887No Hit
ATCAAAAAGAAGACAAAAATAACGCAATAGAACAAAAACGCACACATAAA11.8867924528301887No Hit
CAAACAAAAAAACACAAAAAAAAAAACACAAACAAAAACACACAAAAACA11.8867924528301887No Hit
TCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGATCGAAAGCAGCA11.8867924528301887No Hit
ACACTTTCCAACATAATGACAAAATCAAAAATAACACAACATGAACCCAA11.8867924528301887No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGACTGTC11.8867924528301887No Hit
AAACATAAAATTATCCAATCCGACGTAATCATTATAAATAAAACAAAAAC11.8867924528301887No Hit
CTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATT11.8867924528301887No Hit
GGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCA11.8867924528301887No Hit
ACACAGAAATGGTCCCATTGCACAGGTCTCTGTGTAAAATATACGCAGCA11.8867924528301887No Hit
AGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATATGAATCGCCCAA11.8867924528301887No Hit
ATGCAATATACAAGTTAAATAATCAATACAAACAATACCAACAATATCAA11.8867924528301887No Hit
AAAAAAATTTAATAATTAAAACAAAATCACAAATCCAAAAACCACATCAT11.8867924528301887No Hit
GTTCATTCCTCTCTGGAATCATGTCCATTATTATCTTGTCTGCTTTAATT11.8867924528301887No Hit
CTTATTGAGTGTCTCACGAGTGCGGGACTGCGACATTAGATCCTGTCTCT11.8867924528301887No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA11.8867924528301887No Hit
TACAATTACATAACAATCATGTAAAACCTTACAACCTCTAAATAATACAA11.8867924528301887No Hit
GAGCAATCTTGCAAAAGGAGAGAACGATAATGTGCTAATAGGGCAAGGGG11.8867924528301887No Hit
CGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATC11.8867924528301887No Hit
ATACACACAAACACCACTCTAAACAATAATGACAAAATCACAAATTAAAA11.8867924528301887No Hit
GGACAAACCCTCTGGAGCAAAACAAACGATGCTTGATCAGACCGATTGAT11.8867924528301887No Hit
CACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGTGTGTGTCCTT11.8867924528301887No Hit
GCATTAAGCATCAATGAACAGAGCAAACTAGCAAAATCAGATAACTCCAG11.8867924528301887No Hit
GATTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGCTGTCTCT11.8867924528301887No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACACCCT11.8867924528301887No Hit
ATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTT11.8867924528301887No Hit
TAAAAGAAAATAGAAAAAAAATTTATAATTACCAAAATCGCAACATACAC11.8867924528301887No Hit
TTTTCAAAATAAAAAACAACAAAATAATTGCAAACACAATAATTTTTGAA11.8867924528301887No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC11.8867924528301887No Hit
ACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATC11.8867924528301887No Hit
AATTACAGCAGACAAGAGAATAATGGACATGATTCCATAGAGGAATGAAC11.8867924528301887No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)