FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_G10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCAATCTGTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTG12.4390243902439024No Hit
CCAGAGACCAATGAACAAGGACAAACCCTCTTCAGAAAAACAAACCAACC12.4390243902439024No Hit
GAACAGGAACAGGATACACCATGGACACGGTAAACAGAACACACCAATAC12.4390243902439024No Hit
TTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTA12.4390243902439024No Hit
CTAATCAACATTCTCAAAACATTTCCAATTAAATCCATCAATTCATTCAC12.4390243902439024No Hit
GAGTAGGATGCAATTTTCCTCATTGACTGTGAATGTGAGCTGTCTCTTAT12.4390243902439024No Hit
GAAGACAAGAGATATGGCCCAGCATTAAGAATCAATGAACTGAGCAATCT12.4390243902439024No Hit
CTGTGGACCAGATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG12.4390243902439024No Hit
ATGGATAGCAAATAGTAGCATTGCCACAACTACTTCATTGCATGTGTGAG12.4390243902439024No Hit
GTAATGGTGAAATTTCTCAAACTATTGCTCCCTCCTCAGTGAAAGCCCTT12.4390243902439024No Hit
CTATCCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG12.4390243902439024No Hit
CCACAAGAGGGGTCCAGATTGCTTCAAATGAGAATGTGGAAACCATGGAC12.4390243902439024No Hit
ATCAAAAAGTACACATCAGGAATGAAAGAGAAAAAACCCCAACAAAAAAT12.4390243902439024No Hit
GCCCTTAGTAGTATCAAGGTCTCTAATCCGTTAAAGATTACACTGAAGTT12.4390243902439024No Hit
GAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAAGTTTCAA12.4390243902439024No Hit
TATTAGTACAACAAATAATCAAGAACTTAATCAATCAAACCATCAAAGTA12.4390243902439024No Hit
ATGAAATTCTAAAAAAAATTTTATATCTTCAAAACTATTAAAAGAACCAT12.4390243902439024No Hit
GTAGAAACAAGGTCGTTTTTAAACTATTCGACAACTAATTTATGGCCATC12.4390243902439024No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCC12.4390243902439024No Hit
TCCCCAGCCTTGAAAACTTTAGAGCCTATGTAGATGGATTCGAGCCGAAC12.4390243902439024No Hit
GCATGGAATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGG12.4390243902439024No Hit
GAAAGGTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTAAGTGTCTC12.4390243902439024No Hit
CTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCT12.4390243902439024No Hit
GTAGGTACAGATGAAATTTTCATTATAACAATATCTATGGATTCATATAA12.4390243902439024No Hit
TCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGG12.4390243902439024No Hit
ATACTGGAGATCCTCCATACAGCCATGGAAAAGGAACAGGATACACCATG12.4390243902439024No Hit
GAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGC12.4390243902439024No Hit
ATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCT12.4390243902439024No Hit
TCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACGAGACTGGTT12.4390243902439024No Hit
GAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGCTGTCTCTTATACA12.4390243902439024No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAAAACCATGTCAAG12.4390243902439024No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA12.4390243902439024No Hit
AATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTC12.4390243902439024No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCATTACTATGTTCTTTTCCATGA12.4390243902439024No Hit
GTATCTCATTGCCATCATCAACTTCATTCTAAGTGCCCTCTTCTTCTCCA12.4390243902439024No Hit
ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAATGATTTTT12.4390243902439024No Hit
CATGAATATGAGTCACATCCAACTGCAAAGTTCAACATAACAAAATCATA12.4390243902439024No Hit
CTCCACAAATGAATTCTCAATAAATTCCAATAATAAAACAAATAATGCCA12.4390243902439024No Hit
CAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCA12.4390243902439024No Hit
CTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGGTCTTTGA12.4390243902439024No Hit
CTAGACACCATGGCCTCCACAATGCTAGAAATTCCAACAGGTCTCCTATA12.4390243902439024No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)