FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATTAGCACATTAGCGTTCCCTCCTTTTGCAAGATTGCTCCTGTCTCTT14.3478260869565215No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCTGTCTCTTA14.3478260869565215No Hit
GAGATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTAAAAA14.3478260869565215No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA14.3478260869565215No Hit
GCAGGTGCATTGACTGAAGATCCAGATGAAGGCCTGTCTCTTATACACAT14.3478260869565215No Hit
GGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAG14.3478260869565215No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT14.3478260869565215No Hit
CAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAATTGAATACTGGAGAA14.3478260869565215No Hit
CAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGA14.3478260869565215No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA14.3478260869565215No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGGGATACTCACTAAGACCACTGTG14.3478260869565215No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCATCCTTT14.3478260869565215No Hit
GTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAAT14.3478260869565215No Hit
CTGCCATGCTCTTTGACTTTTACAGAATTGGTAGAGGATTATGACTGTCT14.3478260869565215No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC14.3478260869565215No Hit
GGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTC14.3478260869565215No Hit
GTTATGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGT14.3478260869565215No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTAATCCACCAT14.3478260869565215No Hit
GAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAG14.3478260869565215No Hit
CTCGCGAGATACTCCTAAGACCACTGTGGACCATATGGCCATAATCAAAA14.3478260869565215No Hit
AGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTGTCTCTTATA14.3478260869565215No Hit
TCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGG14.3478260869565215No Hit
ACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCT14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)