FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTTGACATGAGTAATGAAGGGTCTTATTTCTTCGGAGACAATGCAGAG19.090909090909092No Hit
CTCTAGCATACTTACTGTCAGCCAGACAGAGAACAAAAGAATTCGGCTGG19.090909090909092No Hit
GGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGAC19.090909090909092No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACCTGTCTCTTATACACATCT19.090909090909092No Hit
CAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAG19.090909090909092No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC19.090909090909092No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCCATA19.090909090909092No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA19.090909090909092No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG19.090909090909092No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA19.090909090909092No Hit
CCAGCGAGGATTAGGTTTAAAGGACCTCCTGTGCCACCTTAACAAAACAG19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)